Mercurial > repos > yating-l > rename_scaffolds

annotate test-data/sequence_with_noascii.fa @ 3:9529a207d704 draft

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planemo upload commit fb7ce0e9f333b753a39ff171a8fbf39c3b3a069c
author yating-l
date Thu, 26 Jul 2018 13:02:23 -0400
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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3
9529a207d704 planemo upload commit fb7ce0e9f333b753a39ff171a8fbf39c3b3a069c
yating-l
parents:
diff changeset
1 >contig1'abcdé')* _ {/&
9529a207d704 planemo upload commit fb7ce0e9f333b753a39ff171a8fbf39c3b3a069c
yating-l
parents:
diff changeset
2 AAAACTAATTTTATCAAAATCGGACAACTATATCATATAGCTGCCATACG
9529a207d704 planemo upload commit fb7ce0e9f333b753a39ff171a8fbf39c3b3a069c
yating-l
parents:
diff changeset
3 AACGATCGGAAAATTGGTAAGTAAATAATTAAAAATATTATATCTTTGGT
9529a207d704 planemo upload commit fb7ce0e9f333b753a39ff171a8fbf39c3b3a069c
yating-l
parents:
diff changeset
4 >contig2 | 757â763.ii215âii225Stanke, M. and Waack
9529a207d704 planemo upload commit fb7ce0e9f333b753a39ff171a8fbf39c3b3a069c
yating-l
parents:
diff changeset
5 AAAACTAATTTTATCAAAATCGGACAACTATATCATATAGCTGCCATACG
9529a207d704 planemo upload commit fb7ce0e9f333b753a39ff171a8fbf39c3b3a069c
yating-l
parents:
diff changeset
6 AACGATCGGAAAATTGGTAAGTAAATAATTAAAAATATTATATCTTTGGT
9529a207d704 planemo upload commit fb7ce0e9f333b753a39ff171a8fbf39c3b3a069c
yating-l
parents:
diff changeset
7 >contig3 | prediction on sequence number 1 (length = 1992969, name = scaffold1|size1992969) ----- # # Constraints/Hints: # (none) # Predicted genes for sequence number 1 on both strands # start gene g1 scaffold1|size1992969 AUGUSTUS gene 17453 19382 0.11 + . g6 scaffold1|size1992969 AUGUSTUS transcript 17453 19382 0.11 + . g6.t1 scaffold1|size1992969 AUGUSTUS start_codon 17453 17455
9529a207d704 planemo upload commit fb7ce0e9f333b753a39ff171a8fbf39c3b3a069c
yating-l
parents:
diff changeset
8 AAAACTAATTTTATCAAAATCGGACAACTATATCATATAGCTGCCATACG
9529a207d704 planemo upload commit fb7ce0e9f333b753a39ff171a8fbf39c3b3a069c
yating-l
parents:
diff changeset
9 AACGATCGGAAAATTGGTAAGTAAATAATTAAAAATATTATATCTTTGGT
9529a207d704 planemo upload commit fb7ce0e9f333b753a39ff171a8fbf39c3b3a069c
yating-l
parents:
diff changeset
10 >contig4 | 757£763.ii215ôii225Stanke, M. and Waack
9529a207d704 planemo upload commit fb7ce0e9f333b753a39ff171a8fbf39c3b3a069c
yating-l
parents:
diff changeset
11 AAAACTAATTTTATCAAAATCGGACAACTATATCATATAGCTGCCATACG
9529a207d704 planemo upload commit fb7ce0e9f333b753a39ff171a8fbf39c3b3a069c
yating-l
parents:
diff changeset
12 AACGATCGGAAAATTGGTAAGTAAATAATTAAAAATATTATATCTTTGGT