Mercurial > repos > yating-l > snap
comparison tool_dependencies.xml @ 0:57299471d6c1 draft default tip
planemo upload commit 402a746f69e9f1dbb57007536fc36dc6ce3180de
| author | yating-l |
|---|---|
| date | Wed, 12 Apr 2017 17:37:47 -0400 |
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| -1:000000000000 | 0:57299471d6c1 |
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| 1 <?xml version="1.0"?> | |
| 2 <tool_dependency> | |
| 3 <package name="snap" version="1.0"> | |
| 4 <install version="1.0"> | |
| 5 <actions_group> | |
| 6 <actions> | |
| 7 <action type="download_by_url">http://korflab.ucdavis.edu/Software/snap-2013-11-29.tar.gz</action> | |
| 8 <action type="shell_command">make</action> | |
| 9 <action type="move_directory_files"> | |
| 10 <source_directory>.</source_directory> | |
| 11 <destination_directory>$INSTALL_DIR</destination_directory> | |
| 12 </action> | |
| 13 <action type="set_environment"> | |
| 14 <environment_variable name="ZOE" action="set_to">$INSTALL_DIR</environment_variable> | |
| 15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> | |
| 16 </action> | |
| 17 </actions> | |
| 18 </actions_group> | |
| 19 </install> | |
| 20 <readme>SNAP is a general purpose gene finding program suitable for both eukaryotic | |
| 21 and prokaryotic genomes. SNAP is an acroynm for Semi-HMM-based Nucleic Acid | |
| 22 Parser. | |
| 23 </readme> | |
| 24 </package> | |
| 25 </tool_dependency> |