Mercurial > repos > yating-l > trfbig

comparison tool_dependencies.xml @ 0:ba819b65bef3 draft default tip

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planemo upload for repository https://github.com/goeckslab/trfBig commit 97fd3895fbafc69df1a1c4092f261ba23fc0bd0b-dirty
author yating-l
date Mon, 01 May 2017 17:34:42 -0400
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-1:000000000000 0:ba819b65bef3
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <!-- Package trfBig -->
4 <package name="trfBig" version="1.0">
5 <install version="1.0">
6 <actions>
7 <action type="download_binary" target_directory="bin">
8 <url_template os="darwin">http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.${architecture}/trfBig</url_template>
9 <url_template os="linux">http://hgdownload.cse.ucsc.edu/admin/exe/linux.${architecture}/trfBig</url_template>
10 </action>
11 <action type="chmod">
12 <file mode="750">$INSTALL_DIR/bin/trfBig</file>
13 </action>
14 <action type="set_environment">
15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
16 </action>
17 </actions>
18 </install>
19 <readme>The tools downloaded by this dependency definition are free for academic use.</readme>
20 </package>
21
22 <!-- Package trf -->
23 <!-- https://tandem.bu.edu/trf/downloads/trf407b.linux64 -->
24 <package name="trf" version="4.07b">
25 <install version="1.0">
26 <actions_group>
27 <actions architecture="x86_64" os="linux">
28 <action type="download_by_url" target_directory="bin">
29 https://tandem.bu.edu/trf/downloads/trf407b.linux64
30 </action>
31 <action type="move_file" rename_to="trf">
32 <source>trf407b.linux64</source>
33 <destination>$INSTALL_DIR/bin</destination>
34 </action>
35 <action type="chmod">
36 <file mode="750">$INSTALL_DIR/bin/trf</file>
37 </action>
38 <action type="set_environment">
39 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
40 </action>
41 </actions>
42 <actions architecture="x86_64" os="darwin">
43 <action type="download_by_url" target_directory="bin">
44 https://tandem.bu.edu/trf/downloads/trf407b.macos64
45 </action>
46 <action type="move_file" rename_to="trf" os="darwin">
47 <source>trf407b.macos64</source>
48 <destination>$INSTALL_DIR/bin</destination>
49 </action>
50 <action type="chmod">
51 <file mode="750">$INSTALL_DIR/bin/trf</file>
52 </action>
53 <action type="set_environment">
54 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
55 </action>
56 </actions>
57 </actions_group>
58 </install>
59 <readme>The tools downloaded by this dependency definition are free for academic use.</readme>
60 </package>
61 </tool_dependency>