Mercurial > repos > yating-l > twobit_mask_340

comparison test-data/contig1.fasta.bed @ 0:fb318f9a36f3 draft default tip

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planemo upload commit c1f0c5ceaac87b6b1db12160a8f5b287635db61b
author yating-l
date Thu, 01 Jun 2017 14:10:35 -0400
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comparison
equal deleted inserted replaced
-1:000000000000 0:fb318f9a36f3
1 contig1 9130 9428 trf 163 1.8 164 86 2 438 36 12 13 37 1.82 AAAAAAAATTATATCTTCGGTGTTTTTCAACATACAACCTCCTAAGCTTGGAAATAACATTTCTTAATCAGTTCTGAATTTCGAATTAAATTTTTATCAAAATCGGACAACTATACCATATAGCTGTCATAGGAAGGATTGGATAATTAGTGGTAAAATAATAT
2 contig1 15707 15757 trf 20 2.5 19 83 9 55 32 12 2 54 1.49 TATATCATTTATATCTCAG
3 contig1 16261 16302 trf 12 3.4 12 89 0 64 2 36 24 36 1.69 TCCGTCTGTCCG
4 contig1 23387 23483 trf 45 2.2 45 92 1 158 19 22 30 27 1.98 TCGGCGAAGAAATGTGCCACTTCGGCGGCACTTCTTGGAGTCACT
5 contig1 23451 23520 trf 24 2.9 24 80 0 75 15 26 27 30 1.96 TTCGGCGACACTTCTTGAAGTCAG
6 contig1 24200 24233 trf 15 2.2 15 94 0 57 51 12 15 21 1.75 AAACAATGGAATGCT
7 contig1 29159 29628 trf 162 2.9 160 80 8 518 37 12 11 38 1.80 GGAAAACATGAAATAAAAATTATATCTTTCGTGTTTTTTAACATATACCTTCTAAGCTTGAAAATAACATTTTTTATTTGTTCTGAATTTCGAATTAAATTTTATCAAAATCGGACGACTATATCATATAGCTGTCATAGGAACAATCGGAAAATAAGTA
8 contig1 37571 37606 trf 8 4.4 8 88 0 52 31 25 42 0 1.55 GACGGACA
9 contig1 38436 38491 trf 8 6.9 8 79 8 58 0 38 27 34 1.57 TGTCCGTC
10 contig1 38436 38491 trf 12 4.6 12 81 0 65 0 38 27 34 1.57 TGTCCGTCCGTC
11 contig1 38436 38491 trf 20 3.1 18 80 17 69 0 38 27 34 1.57 TGTCCGTCTGTCCGTCCG
12 contig1 43116 43168 trf 2 26.0 2 96 0 95 48 0 1 50 1.12 TA