Mercurial > repos > yating-l > ucsc_blat

comparison blat.xml @ 3:a854b56eb215 draft

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planemo upload commit 13494ed17b2e86cd0fd61a7db61843863b2cf8bd
author yating-l
date Thu, 01 Jun 2017 16:26:08 -0400
parents a1b3d24b55a1
children 545bc7831814
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2:a1b3d24b55a1 3:a854b56eb215
40 </options> 40 </options>
41 <validator type="no_options" message="A built-in database is not available" /> 41 <validator type="no_options" message="A built-in database is not available" />
42 </param> 42 </param>
43 </when> 43 </when>
44 <when value="history"> 44 <when value="history">
45 <param name="database" type="data" format="fasta,twobit" label="Using database file, either a .fa, .nib or .2bit file" /> 45 <param name="database" type="data" format="fasta, twobit" label="Using database file, either a .fa, .nib or .2bit file" />
46 </when> 46 </when>
47 </conditional> 47 </conditional>
48 <param type="data" name="query" format="fasta,twobit" label="Query data, either a .fa, .nib or .2bit file"/> 48 <param type="data" name="query" format="fasta, twobit" label="Query data, either a .fa, .nib or .2bit file"/>
49 <param type="select" name="database_type" format="text" multiple="false" label="database type" help="Choose your database type, the default is dnax" argument="-t"> 49 <param type="select" name="database_type" format="text" multiple="false" label="database type" help="Choose your database type, the default is dnax" argument="-t">
50 <option value="dna">dna - DNA sequence</option> 50 <option value="dna">dna - DNA sequence</option>
51 <option value="prot">prot - protein sequence</option> 51 <option value="prot">prot - protein sequence</option>
52 <option value="dnax" selected="true">dnax - DNA sequence translated in six frames to protein</option> 52 <option value="dnax" selected="true">dnax - DNA sequence translated in six frames to protein</option>
53 </param> 53 </param>