Mercurial > repos > yating-l > ucsc_blat
diff tool_dependencies.xml @ 0:951076264957 draft
planemo upload commit 9e778f6145837bd749e60913d184d3d90e2677df
author | yating-l |
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date | Wed, 12 Apr 2017 17:47:43 -0400 |
parents | |
children | a9d863528f48 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Wed Apr 12 17:47:43 2017 -0400 @@ -0,0 +1,27 @@ +<?xml version="1.0"?> +<tool_dependency> + <!-- required tools: + - blat + - sort + - pslReps + - faPolyASizes + - pslCDnaFilter + --> + <package name="ucsc_tools_340_for_BLAT" version="1.0"> + <install version="1.0"> + <actions_group> + <actions architecture="x86_64" os="linux"> + <action type="download_by_url">http://old-gep.wustl.edu/~galaxy/package_ucsc_tools_340_for_BLAT.tar.gz</action> + <action type="move_directory_files"> + <source_directory>.</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + </actions> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + </action> + </actions_group> + </install> + <readme>The tools and utilities were created by the UCSC Genome Bioinformatics Group</readme> + </package> +</tool_dependency> \ No newline at end of file