Mercurial > repos > yhoogstrate > crossmap

view test-data/test_bam_01_output_a.sam @ 0:bfcdabc062ca draft

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit d4e9fe61901a612c78d9f26f172537b27fd2ddbb
author yhoogstrate
date Wed, 26 Aug 2015 11:04:47 -0400
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@HD	VN:1.0	SO:coordinate
@SQ	SN:chr1	LN:247249719
@SQ	SN:chr10	LN:135374737
@SQ	SN:chr2	LN:242951149
@SQ	SN:chr3	LN:199501827
@SQ	SN:chr4	LN:191273063
@PG	ID:-	VN:1.0.0	CL:cmatrix
@PG	ID:CrossMap	VN:0.2
@CO	Test data for CrossMap bam
@CO	Liftover from original BAM/SAM file: 
@CO	Liftover is based on the chain file: 
read_001	0	chr1	89863	60	50M	=	1	0	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	*
read_002	0	chr2	90000	60	50M	chr1	1	0	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	*
read_003	0	chr3	75000	60	50M	chr1	1	0	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	*
read_006	0	chr1	989863	60	50M	=	1	0	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	*
read_007	0	chr2	990000	60	50M	chr1	1	0	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	*
read_008	0	chr3	975000	60	50M	chr1	1	0	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	*
read_011	16	chr1	89863	60	50M	=	1	0	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	*
read_012	16	chr2	90000	60	50M	chr1	1	0	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	*
read_013	16	chr3	75000	60	50M	chr1	1	0	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	*
read_016	16	chr1	989863	60	50M	=	1	0	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	*
read_017	16	chr2	990000	60	50M	chr1	1	0	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	*
read_018	16	chr3	975000	60	50M	chr1	1	0	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	*