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view tool_dependencies.xml @ 1:63bd455ed299 draft

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planemo upload for repository https://bitbucket.org/EMCbioinf/galaxy-tool-shed-tools/raw/master/featurecounts commit 0eac9a776e7bc33275b8ef5e76a4f17b7b5c1259-dirty
author yhoogstrate
date Mon, 01 Jun 2015 07:18:31 -0400
parents ab0323782bb5
children b5c93611d2c5
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<?xml version="1.0"?>
<tool_dependency>
	<package name="featurecounts" version="1.4.6.p1">
		<repository changeset_revision="a4c247fdd71b" name="package_featurecounts_1_4_6" owner="yhoogstrate" toolshed="https://toolshed.g2.bx.psu.edu" />
	</package>
	
	<package name="featurecounts2bed" version="1.0.0">
		<install version="1.0">
			<actions>
				<action type="shell_command">mkdir $INSTALL_DIR/bin ; cp $REPOSITORY_INSTALL_DIR/featurecounts2bed.sh $INSTALL_DIR/bin/</action>
				<action type="chmod">
					<file mode="755">$INSTALL_DIR/bin/featurecounts2bed.sh</file>
				</action>
				<action type="set_environment">
					<environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
					<environment_variable action="prepend_to" name="PATH">$REPOSITORY_INSTALL_DIR</environment_variable>
				</action>
			</actions>
		</install>
	</package>
</tool_dependency>