Mercurial > repos > yhoogstrate > fuma

comparison test-data/edgren_test_03_specific_matching_output.txt @ 9:b21145d59d9c draft default tip

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/fuma commit 7bf6f3629e96bcaaed8770badd11366889efa99c
author erasmusmc
date Mon, 23 Jan 2017 09:41:08 -0500
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8:8366a8c82a7a 9:b21145d59d9c
1 Left-genes Right-genes Spans large gene (>200000bp) edgren_fusion-map.txt edgren_true_positives.txt
2 NR_120540 UBA2 FALSE TRUE FALSE
3 NR_024091:ZFP91:ZFP91-CNTF LINC00261 FALSE TRUE FALSE
4 FAT3 CASC5 TRUE TRUE FALSE
5 FAM208B FAM208B FALSE TRUE FALSE
6 FRMD4A FRMD4A TRUE TRUE FALSE
7 NM_001291876:NM_001291877:TACC2 RPLP1 TRUE TRUE FALSE
8 EEF1A1 GHITM FALSE TRUE TRUE
9 RYBP YAF2 FALSE TRUE TRUE
10 NM_001290002:NM_001290004:NR_120486:NR_120487:ZNF385A NR_120486:NR_120487:ZNF385A FALSE TRUE FALSE
11 POR PUS1 FALSE TRUE TRUE
12 NM_001293212:NM_001293213:NM_001293214:NM_001293215:NM_001293216:NR_120608:TUBB KRT80 FALSE TRUE TRUE
13 HNRNPK AATF FALSE TRUE TRUE
14 MYO19 SKA2 FALSE TRUE FALSE
15 MED1 ACSF2:NM_001288968:NM_001288969:NM_001288970:NM_001288971:NM_001288972:NR_110232 FALSE TRUE FALSE
16 ARHGAP27:NM_001282290 ARHGAP27:NM_001282290 FALSE TRUE FALSE
17 BCAS3 MED13 TRUE TRUE FALSE
18 BPTF AMZ2:NM_001289054:NM_001289056 FALSE TRUE FALSE
19 CARD14 CARD14 FALSE TRUE FALSE
20 PDCD2 RPL26 FALSE TRUE TRUE
21 PLD3 NM_001291311:PLD3 FALSE TRUE FALSE
22 ARFIP1:NM_001287431:NM_001287432:NM_001287433 DPY19L3 FALSE TRUE TRUE
23 LOC644961:TMEM222 ACTG1:NR_037688 FALSE TRUE FALSE
24 SARS ME2 FALSE TRUE FALSE
25 NOS1AP C1orf226 TRUE TRUE FALSE
26 KISS1 GOLT1A FALSE TRUE FALSE
27 CC2D1B DTYMK FALSE TRUE FALSE
28 SYTL1 HSP90AB1 FALSE TRUE FALSE
29 PAK2 MAGEA10:MAGEA10-MAGEA5 FALSE TRUE FALSE
30 TMCC1 TMCC1 TRUE TRUE FALSE
31 HPS3:NM_001308258:NR_046371 CP:NR_046371 FALSE TRUE FALSE
32 RSRC1 RSRC1 TRUE TRUE FALSE
33 GREB1 GREB1 FALSE TRUE FALSE
34 NR_130784 NR_037904:SCLY TRUE TRUE FALSE
35 PNKD:TMBIM1 PNKD:TMBIM1 FALSE TRUE FALSE
36 PTMA RGL2 FALSE TRUE FALSE
37 SLC30A5 AZIN1:NM_001301668 FALSE TRUE FALSE
38 NM_001286052:NM_001286053:NM_001286054:NM_001289931:NR_110527:ZNF595:ZNF718 PSPH FALSE TRUE FALSE
39 INIP C5 FALSE TRUE FALSE
40 RALGPS1 RALGPS1 TRUE TRUE FALSE
41 SULF2 ARFGEF2 FALSE TRUE FALSE
42 NDUFA1 SYNJ2BP:SYNJ2BP-COX16 FALSE TRUE TRUE
43 YLPM1 ITPK1 FALSE TRUE FALSE
44 LAMP1 MCF2L2 TRUE FALSE TRUE
45 PPP1R12A SEPT10 FALSE FALSE TRUE
46 CPNE1:NM_001198863:NR_037188 PI3 FALSE FALSE TRUE
47 DHX35 ITCH FALSE FALSE TRUE
48 NM_001281771:NM_001281772:NM_001281773:NM_001281774:NM_001281775:NM_001281776:NM_001281777:NM_001281778:NM_001281779:NM_001281780:NM_001281781:NM_001281782:NM_001281783:NM_001281784:ZMYND8 CEP250 FALSE FALSE TRUE
49 RARA PKIA FALSE FALSE TRUE
50 STARD3 DOK5:NM_177959 FALSE FALSE TRUE
51 NR_036633:VAPB IKZF3:NM_001284514:NM_001284515 FALSE FALSE TRUE
52 RAB22A MYO9B FALSE FALSE TRUE
53 ACACA STAC2 TRUE TRUE TRUE
54 ANKHD1:ANKHD1-EIF4EBP3 PCDH1 FALSE TRUE TRUE