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diff test-data/edgren_test_03_specific_matching_output.txt @ 9:b21145d59d9c draft default tip

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/fuma commit 7bf6f3629e96bcaaed8770badd11366889efa99c
author erasmusmc
date Mon, 23 Jan 2017 09:41:08 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/edgren_test_03_specific_matching_output.txt	Mon Jan 23 09:41:08 2017 -0500
@@ -0,0 +1,54 @@
+Left-genes	Right-genes	Spans large gene (>200000bp)	edgren_fusion-map.txt	edgren_true_positives.txt
+NR_120540	UBA2	FALSE	TRUE	FALSE
+NR_024091:ZFP91:ZFP91-CNTF	LINC00261	FALSE	TRUE	FALSE
+FAT3	CASC5	TRUE	TRUE	FALSE
+FAM208B	FAM208B	FALSE	TRUE	FALSE
+FRMD4A	FRMD4A	TRUE	TRUE	FALSE
+NM_001291876:NM_001291877:TACC2	RPLP1	TRUE	TRUE	FALSE
+EEF1A1	GHITM	FALSE	TRUE	TRUE
+RYBP	YAF2	FALSE	TRUE	TRUE
+NM_001290002:NM_001290004:NR_120486:NR_120487:ZNF385A	NR_120486:NR_120487:ZNF385A	FALSE	TRUE	FALSE
+POR	PUS1	FALSE	TRUE	TRUE
+NM_001293212:NM_001293213:NM_001293214:NM_001293215:NM_001293216:NR_120608:TUBB	KRT80	FALSE	TRUE	TRUE
+HNRNPK	AATF	FALSE	TRUE	TRUE
+MYO19	SKA2	FALSE	TRUE	FALSE
+MED1	ACSF2:NM_001288968:NM_001288969:NM_001288970:NM_001288971:NM_001288972:NR_110232	FALSE	TRUE	FALSE
+ARHGAP27:NM_001282290	ARHGAP27:NM_001282290	FALSE	TRUE	FALSE
+BCAS3	MED13	TRUE	TRUE	FALSE
+BPTF	AMZ2:NM_001289054:NM_001289056	FALSE	TRUE	FALSE
+CARD14	CARD14	FALSE	TRUE	FALSE
+PDCD2	RPL26	FALSE	TRUE	TRUE
+PLD3	NM_001291311:PLD3	FALSE	TRUE	FALSE
+ARFIP1:NM_001287431:NM_001287432:NM_001287433	DPY19L3	FALSE	TRUE	TRUE
+LOC644961:TMEM222	ACTG1:NR_037688	FALSE	TRUE	FALSE
+SARS	ME2	FALSE	TRUE	FALSE
+NOS1AP	C1orf226	TRUE	TRUE	FALSE
+KISS1	GOLT1A	FALSE	TRUE	FALSE
+CC2D1B	DTYMK	FALSE	TRUE	FALSE
+SYTL1	HSP90AB1	FALSE	TRUE	FALSE
+PAK2	MAGEA10:MAGEA10-MAGEA5	FALSE	TRUE	FALSE
+TMCC1	TMCC1	TRUE	TRUE	FALSE
+HPS3:NM_001308258:NR_046371	CP:NR_046371	FALSE	TRUE	FALSE
+RSRC1	RSRC1	TRUE	TRUE	FALSE
+GREB1	GREB1	FALSE	TRUE	FALSE
+NR_130784	NR_037904:SCLY	TRUE	TRUE	FALSE
+PNKD:TMBIM1	PNKD:TMBIM1	FALSE	TRUE	FALSE
+PTMA	RGL2	FALSE	TRUE	FALSE
+SLC30A5	AZIN1:NM_001301668	FALSE	TRUE	FALSE
+NM_001286052:NM_001286053:NM_001286054:NM_001289931:NR_110527:ZNF595:ZNF718	PSPH	FALSE	TRUE	FALSE
+INIP	C5	FALSE	TRUE	FALSE
+RALGPS1	RALGPS1	TRUE	TRUE	FALSE
+SULF2	ARFGEF2	FALSE	TRUE	FALSE
+NDUFA1	SYNJ2BP:SYNJ2BP-COX16	FALSE	TRUE	TRUE
+YLPM1	ITPK1	FALSE	TRUE	FALSE
+LAMP1	MCF2L2	TRUE	FALSE	TRUE
+PPP1R12A	SEPT10	FALSE	FALSE	TRUE
+CPNE1:NM_001198863:NR_037188	PI3	FALSE	FALSE	TRUE
+DHX35	ITCH	FALSE	FALSE	TRUE
+NM_001281771:NM_001281772:NM_001281773:NM_001281774:NM_001281775:NM_001281776:NM_001281777:NM_001281778:NM_001281779:NM_001281780:NM_001281781:NM_001281782:NM_001281783:NM_001281784:ZMYND8	CEP250	FALSE	FALSE	TRUE
+RARA	PKIA	FALSE	FALSE	TRUE
+STARD3	DOK5:NM_177959	FALSE	FALSE	TRUE
+NR_036633:VAPB	IKZF3:NM_001284514:NM_001284515	FALSE	FALSE	TRUE
+RAB22A	MYO9B	FALSE	FALSE	TRUE
+ACACA	STAC2	TRUE	TRUE	TRUE
+ANKHD1:ANKHD1-EIF4EBP3	PCDH1	FALSE	TRUE	TRUE