Mercurial > repos > ynewton > plot_distribution
annotate plot_distribution.xml @ 3:f180c4ef9128 draft default tip
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| author | ynewton |
|---|---|
| date | Fri, 18 Jan 2013 12:18:45 -0500 |
| parents | 81d08949af15 |
| children |
| rev | line source |
|---|---|
| 3 | 1 <tool id="matrix_normalize" name="Plot Distribution" version="1.1.0"> |
| 1 | 2 <description>Plot Distribution</description> |
| 3 <command interpreter="Rscript">plot_distribution.r $tableData $outfile | |
| 4 </command> | |
| 5 <inputs> | |
| 6 <param name="tableData" format="tabular" type="data" label="Input data"/> | |
| 7 </inputs> | |
| 8 <outputs> | |
| 9 <data name="outfile" format="pdf"/> | |
| 10 </outputs> | |
| 11 <help> | |
| 12 **What it does** | |
| 13 | |
| 14 This tool outputs histogram and distribution of tabular data. Assumes that the first row contains column headers and the first column contains row annotations (e.g. gene names). Considers everything else as data. Data can be either a single column or a matrix of values. Produces a pdf file. | |
| 15 | |
| 16 </help> | |
| 17 </tool> |