|
0
|
1 filename /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/data/smp0.res.txt
|
|
|
2 is_pairEnd 0
|
|
|
3 clipping_plot_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp0.clipping_profile.png
|
|
|
4 mapq_plot_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp0.mapq_profile.png
|
|
|
5 mapq_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/data/smp0.mapq_profile.xls
|
|
|
6 read_cov_plot_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp0.geneBodyCoverage.png
|
|
|
7 trans_cov_plot_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp0.TransCoverage.png
|
|
|
8 insert_plot_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp0.inner_distance_plot.png
|
|
|
9 insert_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/data/smp0.inner_distance_freq.txt
|
|
|
10 read_dist_plot_file1 /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp0.read_distr.png
|
|
|
11 read_dist_plot_file2 /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp0.read_distr_pie.png
|
|
|
12 readLen_plot_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp0.readlen_profile.png
|
|
|
13 geneCount_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/data/smp0.geneAbundance.txt
|
|
|
14 seqDeDup_percent 0.000000
|
|
|
15 posDeDup_percent 0.000000
|
|
|
16 no_clipping 0
|
|
|
17 no_rRNA 0
|
|
|
18 total_reads 77686
|
|
|
19 uniq_mapped_reads 64349
|
|
|
20 multi_mapped_reads 13337
|
|
|
21 unmapped_reads 0
|
|
|
22 low_qual 0
|
|
|
23 low_qual_read1 0
|
|
|
24 low_qual_read2 0
|
|
|
25 pcr_dup 0
|
|
|
26 rRNA_read 8521
|
|
|
27 cds_read 24065
|
|
|
28 utr5_read 1500
|
|
|
29 utr3_read 15884
|
|
|
30 intron_read 8486
|
|
|
31 itgup1k_read 169
|
|
|
32 itgdn1k_read 452
|
|
|
33 itg_read 13287
|
|
|
34 unmapped_read1 0
|
|
|
35 unmapped_read2 0
|
|
|
36 mapped_read1 0
|
|
|
37 mapped_read2 0
|
|
|
38 forward_read 31875
|
|
|
39 reverse_read 32474
|
|
|
40 paired_reads 0
|
|
|
41 mapped_plus_minus 0
|
|
|
42 mapped_plus_plus 0
|
|
|
43 mapped_minus_plus 0
|
|
|
44 mapped_minus_minus 0
|
|
|
45 ins_read 0
|
|
|
46 del_read 0
|
|
|
47 noSplice 50449
|
|
|
48 splice 13900
|
|
|
49 paired_diff_chrom 0
|
