annotate ezBAMQC/src/htslib/cram/rANS_static.h @ 20:9de3bbec2479 draft default tip

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date Thu, 31 Mar 2016 10:10:37 -0400
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1 /*
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2 * Copyright (c) 2014 Genome Research Ltd.
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3 * Author(s): James Bonfield
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4 *
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5 * Redistribution and use in source and binary forms, with or without
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6 * modification, are permitted provided that the following conditions are met:
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7 *
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8 * 1. Redistributions of source code must retain the above copyright notice,
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9 * this list of conditions and the following disclaimer.
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10 *
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11 * 2. Redistributions in binary form must reproduce the above
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12 * copyright notice, this list of conditions and the following
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13 * disclaimer in the documentation and/or other materials provided
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14 * with the distribution.
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15 *
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16 * 3. Neither the names Genome Research Ltd and Wellcome Trust Sanger
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17 * Institute nor the names of its contributors may be used to endorse
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18 * or promote products derived from this software without specific
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19 * prior written permission.
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20 *
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21 * THIS SOFTWARE IS PROVIDED BY GENOME RESEARCH LTD AND CONTRIBUTORS "AS
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22 * IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
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23 * TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A
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24 * PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL GENOME RESEARCH
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25 * LTD OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
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26 * SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
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27 * LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
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28 * DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
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29 * THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
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30 * (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
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31 * OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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32 */
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33
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34
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35 #ifndef RANS_STATIC_H
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36 #define RANS_STATIC_H
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37
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38 unsigned char *rans_compress(unsigned char *in, unsigned int in_size,
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39 unsigned int *out_size, int order);
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40 unsigned char *rans_uncompress(unsigned char *in, unsigned int in_size,
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41 unsigned int *out_size);
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42
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44 #endif /* RANS_STATIC_H */