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comparison ezBAMQC/src/htslib/cram/rANS_static.h @ 0:dfa3745e5fd8

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author youngkim
date Thu, 24 Mar 2016 17:12:52 -0400
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-1:000000000000 0:dfa3745e5fd8
1 /*
2 * Copyright (c) 2014 Genome Research Ltd.
3 * Author(s): James Bonfield
4 *
5 * Redistribution and use in source and binary forms, with or without
6 * modification, are permitted provided that the following conditions are met:
7 *
8 * 1. Redistributions of source code must retain the above copyright notice,
9 * this list of conditions and the following disclaimer.
10 *
11 * 2. Redistributions in binary form must reproduce the above
12 * copyright notice, this list of conditions and the following
13 * disclaimer in the documentation and/or other materials provided
14 * with the distribution.
15 *
16 * 3. Neither the names Genome Research Ltd and Wellcome Trust Sanger
17 * Institute nor the names of its contributors may be used to endorse
18 * or promote products derived from this software without specific
19 * prior written permission.
20 *
21 * THIS SOFTWARE IS PROVIDED BY GENOME RESEARCH LTD AND CONTRIBUTORS "AS
22 * IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
23 * TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A
24 * PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL GENOME RESEARCH
25 * LTD OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
26 * SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
27 * LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
28 * DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
29 * THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
30 * (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
31 * OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
32 */
33
34
35 #ifndef RANS_STATIC_H
36 #define RANS_STATIC_H
37
38 unsigned char *rans_compress(unsigned char *in, unsigned int in_size,
39 unsigned int *out_size, int order);
40 unsigned char *rans_uncompress(unsigned char *in, unsigned int in_size,
41 unsigned int *out_size);
42
43
44 #endif /* RANS_STATIC_H */