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author | yufei-luo |
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date | Mon, 13 May 2013 10:06:30 -0400 |
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# boxplotCounts # boxplots representing counts distribution per sample # input : counts, target, projectName, type of data (raw or norm) # output : boxplot (png) # created Feb 7th, 2012 # modified April 30th, 2012 # Marie-Anges Dillies boxplotCounts <- function( counts, group, type = c("raw", "norm"), OUT_boxplotCountsName, out = TRUE ){ if (out) png( file=OUT_boxplotCountsName ) boxplot( log2(counts+1), col=as.integer(group)+1, main = paste(type[1], " counts distribution", sep="" ) ) legend( "topright", as.character(unique(group)), lty=1, col=as.integer(unique(group))+1 ) if (out) dev.off() }