Mercurial > repos > yufei-luo > s_mart

annotate commons/launcher/tests/MockOutputForBlat.py @ 19:9bcfa7936eec

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author m-zytnicki
date Mon, 29 Apr 2013 03:23:29 -0400
parents 94ab73e8a190
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1 class MockOutputForBlat(object):
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2
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3 def write(self, inFileName):
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4 f = open(inFileName, 'w')
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5 f.write('gi|226792305|gb|GO545799.1|GO545799 290 551 Vein_ctg_10639 674 935 1.0e-130 463.0 93.51\n')
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6 f.write('gi|226792305|gb|GO545799.1|GO545799 138 283 Vein_ctg_10639 519 664 1.0e-50 198.0 82.88\n')
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7 f.write('gi|226792305|gb|GO545799.1|GO545799 577 686 Vein_ctg_10639 961 1070 1.4e-46 184.0 90.91\n')
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8 f.write('gi|226792305|gb|GO545799.1|GO545799 566 572 Vein_ctg_10639 944 950 3.1e+05 13.0 100.00\n')
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9 f.write('gi|226792293|gb|GO546055.1|GO546055 107 193 Vein_ctg_10638 87 1 2.2e-42 170.0 100.00\n')
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10 f.write('gi|226792293|gb|GO546055.1|GO546055 34 91 Vein_ctg_10638 161 104 2.5e-22 103.0 94.83\n')
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11 f.write('gi|226792293|gb|GO546055.1|GO546055 521 611 Vein_ctg_10639 1075 985 2.9e-38 156.0 92.31\n')
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12 f.write('gi|226790810|gb|GO546215.1|GO546215 57 520 Vein_ctg_5197 1862 1399 8.7e-128 454.0 72.84\n')
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13 f.write('gi|226790791|gb|GO546209.1|GO546209 135 199 Vein_ctg_5197 1994 1930 7.4e-25 112.0 93.85\n')
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14 f.write('gi|226790791|gb|GO546209.1|GO546209 36 82 Vein_ctg_5197 2126 2080 1.9e-06 50.0 76.60\n')
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15 f.write('gi|226790483|gb|GO545656.1|GO545656 280 541 Vein_ctg_10639 674 935 1.0e-130 463.0 93.51\n')
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16 f.write('gi|226790483|gb|GO545656.1|GO545656 128 273 Vein_ctg_10639 519 664 1.0e-50 198.0 82.88\n')
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17 f.write('gi|226790483|gb|GO545656.1|GO545656 567 640 Vein_ctg_10639 961 1034 1.1e-25 114.0 87.84\n')
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18 f.write('gi|226790483|gb|GO545656.1|GO545656 556 562 Vein_ctg_10639 944 950 3.1e+05 13.0 100.00\n')
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19 f.write('gi|226790458|gb|GO545644.1|GO545644 1 95 Vein_ctg_10638 1369 1275 3.5e-40 163.0 92.63\n')
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20 f.write('gi|226790458|gb|GO545644.1|GO545644 146 185 Vein_ctg_10638 1225 1186 3.7e-07 53.0 82.50\n')
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21 f.write('gi|226790049|gb|GO546186.1|GO546186 177 263 Vein_ctg_10638 87 1 5.6e-39 159.0 96.55\n')
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22 f.write('gi|226790049|gb|GO546186.1|GO546186 106 161 Vein_ctg_10638 159 104 3.8e-21 99.0 94.64\n')
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23 f.write('gi|226790011|gb|GO546174.1|GO546174 138 283 Vein_ctg_10639 519 664 1.0e-50 198.0 82.88\n')
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24 f.write('gi|226789634|gb|GO545875.1|GO545875 135 306 Vein_ctg_10638 1446 1275 7.3e-80 294.0 91.86\n')
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25 f.write('gi|226789634|gb|GO545875.1|GO545875 451 496 Vein_ctg_10638 1132 1087 1.8e-18 90.0 100.00\n')
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26 f.write('gi|226789634|gb|GO545875.1|GO545875 357 393 Vein_ctg_10638 1225 1189 1.8e-05 47.0 81.08\n')
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27 f.write('gi|226789597|gb|GO546106.1|GO546106 432 537 Vein_ctg_2286 1166 1061 5.0e-40 162.0 86.79\n')
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28 f.write('gi|226789597|gb|GO546106.1|GO546106 538 632 Vein_ctg_2286 1008 914 6.0e-33 139.0 85.26\n')
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29 f.write('gi|226789571|gb|GO546096.1|GO546096 353 474 Vein_ctg_5197 2426 2305 4.1e-46 182.0 84.43\n')
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30 f.write('gi|226789566|gb|GO545840.1|GO545840 73 232 Vein_ctg_10639 776 935 2.5e-75 279.0 92.50\n')
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31 f.write('gi|226789566|gb|GO545840.1|GO545840 258 372 Vein_ctg_10639 961 1075 4.2e-50 196.0 92.17\n')
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32 f.write('gi|226789566|gb|GO545840.1|GO545840 247 253 Vein_ctg_10639 944 950 3.1e+05 13.0 100.00\n')
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33 f.close()