comparison SMART/galaxy/ConvertTranscriptFile_Gff3ToGff2.xml @ 15:440ceca58672

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author m-zytnicki
date Mon, 22 Apr 2013 11:08:07 -0400
parents 769e306b7933
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14:c79b9ae3f65f 15:440ceca58672
1 <tool id="ConvertTranscriptFile_Gff3ToGff2" name="Gff3 -> Gff2">
2 <description>Convert Gff3 File to Gff2 File.</description>
3 <command interpreter="python"> ../Java/Python/convertTranscriptFile.py -i $inputFile -f gff3 -o $outputFile -g gff2 yes 2>$logFile </command>
4 <inputs>
5 <param name="inputFile" type="data" label="Input File" format="gff3"/>
6 </inputs>
7
8 <outputs>
9 <data format="gff" name="outputFile" label="[gff3 -> gff2] Output File"/>
10 <data format="txt" name="logFile" label="[gff3 -> gff2] Log File"/>
11 </outputs>
12
13 <help>
14 </help>
15 </tool>