Mercurial > repos > yufei-luo > s_mart
comparison SMART/galaxy/CountReadGCPercent.xml @ 36:44d5973c188c
Uploaded
| author | m-zytnicki |
|---|---|
| date | Tue, 30 Apr 2013 15:02:29 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| 35:d94018ca4ada | 36:44d5973c188c |
|---|---|
| 1 <tool id="CountReadGCPercent" name="count read GCpercent"> | |
| 2 <description>Count GC percent for each read against a genome.</description> | |
| 3 <command interpreter="python"> ../Java/Python/CountReadGCPercent.py -i $inputFastaFile -j $inputGffFile -o $outputFile</command> | |
| 4 <inputs> | |
| 5 <param name="inputFastaFile" type="data" label="Input reference fasta File" format="fasta"/> | |
| 6 <param name="inputGffFile" type="data" label="Input File" format="gff3"/> | |
| 7 </inputs> | |
| 8 | |
| 9 <outputs> | |
| 10 <data format="gff3" name="outputFile" label="[CountReadGCPercent] Output File"/> | |
| 11 </outputs> | |
| 12 | |
| 13 <help> | |
| 14 Count the GC% of a FASTA file. | |
| 15 </help> | |
| 16 </tool> | |
| 17 |