Mercurial > repos > yufei-luo > s_mart

comparison smart_toolShed/SMART/Java/Global.java @ 0:e0f8dcca02ed

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
author yufei-luo
date Thu, 17 Jan 2013 10:52:14 -0500
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:e0f8dcca02ed
1 /**
2 *
3 * Copyright INRA-URGI 2009-2010
4 *
5 * This software is governed by the CeCILL license under French law and
6 * abiding by the rules of distribution of free software. You can use,
7 * modify and/ or redistribute the software under the terms of the CeCILL
8 * license as circulated by CEA, CNRS and INRIA at the following URL
9 * "http://www.cecill.info".
10 *
11 * As a counterpart to the access to the source code and rights to copy,
12 * modify and redistribute granted by the license, users are provided only
13 * with a limited warranty and the software's author, the holder of the
14 * economic rights, and the successive licensors have only limited
15 * liability.
16 *
17 * In this respect, the user's attention is drawn to the risks associated
18 * with loading, using, modifying and/or developing or reproducing the
19 * software by the user in light of its specific status of free software,
20 * that may mean that it is complicated to manipulate, and that also
21 * therefore means that it is reserved for developers and experienced
22 * professionals having in-depth computer knowledge. Users are therefore
23 * encouraged to load and test the software's suitability as regards their
24 * requirements in conditions enabling the security of their systems and/or
25 * data to be ensured and, more generally, to use and operate it in the
26 * same conditions as regards security.
27 *
28 * The fact that you are presently reading this means that you have had
29 * knowledge of the CeCILL license and that you accept its terms.
30 *
31 */
32 import java.util.Vector;
33 import java.util.HashMap;
34 import javax.swing.DefaultListModel;
35 import javax.swing.JButton;
36 import javax.swing.JTextField;
37
38 public class Global {
39
40 public static int logAreaSize = 100;
41
42 public static String smartConfFileName = "smart.conf";
43
44 public static String smartProgramsFileName = "programs.txt";
45
46 public static String smartFormatsFileName = "formats.txt";
47
48 public static String pythonPath = new String();
49
50 public static String pythonCommand = "python";
51
52 public static String mysqlCommand = "mysql";
53
54 public static String rCommand = "R";
55
56 public static Files files = new Files();
57
58 public static Vector < String > fileNames = new Vector < String >();
59
60 public static FormatsContainer formats = new FormatsContainer();
61
62 public static boolean programRunning = false;
63
64 public static HashMap < JButton, JTextField > otherFilesChooser = new HashMap < JButton, JTextField >();
65
66 public static HashMap < JButton, JTextField > otherDirectoriesChooser = new HashMap < JButton, JTextField >();
67
68 public static HashMap < JButton, JTextField > otherFileConcatenationChooser = new HashMap < JButton, JTextField >();
69
70 }