diff SMART/DiffExpAnal/DESeqTools/histoRawp.R @ 31:0ab839023fe4

Uploaded
author m-zytnicki
date Tue, 30 Apr 2013 14:33:21 -0400
parents 94ab73e8a190
children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/SMART/DiffExpAnal/DESeqTools/histoRawp.R	Tue Apr 30 14:33:21 2013 -0400
@@ -0,0 +1,18 @@
+# histoRawp
+# histogram of raw p-values
+
+# input : res, OUT_histoRawpName
+# output : histogram (png)
+
+
+histoRawp <- function( res, OUT_histoRawpName, out = TRUE ){
+
+  if (out) png( file=OUT_histoRawpName )
+  
+  ind <- grep("val", colnames(res))
+  hist( res[,ind], nclass=50, xlab="Raw p-values", main="", col="skyblue" )
+
+  if (out) dev.off()
+}
+
+