Mercurial > repos > yufei-luo > s_mart
diff SMART/galaxy/CountReadGCPercent.xml @ 31:0ab839023fe4
Uploaded
author | m-zytnicki |
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date | Tue, 30 Apr 2013 14:33:21 -0400 |
parents | 94ab73e8a190 |
children |
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--- a/SMART/galaxy/CountReadGCPercent.xml Mon Apr 29 03:45:52 2013 -0400 +++ b/SMART/galaxy/CountReadGCPercent.xml Tue Apr 30 14:33:21 2013 -0400 @@ -1,8 +1,5 @@ -<tool id="CountReadGCPercent" name="count read GC percent"> +<tool id="CountReadGCPercent" name="count read GCpercent"> <description>Count GC percent for each read against a genome.</description> - <requirements> - <requirement type="set_environment">PYTHONPATH</requirement> - </requirements> <command interpreter="python"> ../Java/Python/CountReadGCPercent.py -i $inputFastaFile -j $inputGffFile -o $outputFile</command> <inputs> <param name="inputFastaFile" type="data" label="Input reference fasta File" format="fasta"/> @@ -10,11 +7,10 @@ </inputs> <outputs> - <data format="gff3" name="outputFile" label="[count read GC percent] Output File"/> + <data format="gff3" name="outputFile" label="[CountReadGCPercent] Output File"/> </outputs> <help> -Count the GC% of a FASTA file. </help> </tool>