diff SMART/galaxy/restrictSequenceList.xml @ 31:0ab839023fe4

Uploaded
author m-zytnicki
date Tue, 30 Apr 2013 14:33:21 -0400
parents 769e306b7933
children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/SMART/galaxy/restrictSequenceList.xml	Tue Apr 30 14:33:21 2013 -0400
@@ -0,0 +1,16 @@
+<tool id="restrictSequenceList" name="restrict sequence list">
+  <description>Keep the elements of a list of sequences whose name is mentionned in a given file.</description>
+  <command interpreter="python"> ../Java/Python/restrictSequenceList.py -i $inputFile -f fasta -n $name -o $outputFile </command>
+  
+  <inputs>
+	<param name="inputFile" type="data" label="Input fasta File" format="fasta"/>
+	<param name="name" type="data" label="The txt file contains the names of the transcripts." format="txt"/> 
+  </inputs>
+
+  <outputs>
+    <data format="fasta" name="outputFile" label="[restrictSequenceList] Output File"/>
+  </outputs>
+
+  <help>
+  </help>
+</tool>