Mercurial > repos > yufei-luo > s_mart

diff SMART/DiffExpAnal/DESeqTools/histoRawp.R @ 18:94ab73e8a190

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author m-zytnicki
date Mon, 29 Apr 2013 03:20:15 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/SMART/DiffExpAnal/DESeqTools/histoRawp.R	Mon Apr 29 03:20:15 2013 -0400
@@ -0,0 +1,18 @@
+# histoRawp
+# histogram of raw p-values
+
+# input : res, OUT_histoRawpName
+# output : histogram (png)
+
+
+histoRawp <- function( res, OUT_histoRawpName, out = TRUE ){
+
+  if (out) png( file=OUT_histoRawpName )
+  
+  ind <- grep("val", colnames(res))
+  hist( res[,ind], nclass=50, xlab="Raw p-values", main="", col="skyblue" )
+
+  if (out) dev.off()
+}
+
+