--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/commons/launcher/tests/Test_F_LaunchMap.py	Mon Apr 29 03:20:15 2013 -0400
@@ -0,0 +1,41 @@
+import unittest
+import os
+import subprocess
+from commons.core.utils.FileUtils import FileUtils
+from commons.launcher.LaunchMap import LaunchMap
+
+class Test_F_LaunchMap(unittest.TestCase):
+
+    def setUp(self):
+        self._fastaFileName = "LaunchMap_seqCluster1.fa"
+        fastaFilePath = "%s/Tools/%s" % (os.environ["REPET_DATA"], self._fastaFileName)
+        os.symlink(fastaFilePath, self._fastaFileName)
+        self._obsFileName = "%s.fa_aln" % self._fastaFileName
+
+    def tearDown(self):
+        os.remove(self._fastaFileName)
+        try:
+            os.remove(self._obsFileName)
+        except: pass
+
+    def test_run_as_script(self):
+        expFileName = "%s/Tools/expLaunchMap_seqCluster1.fa.fa_aln" % os.environ["REPET_DATA"]
+        obsFileName = "obs.fa_aln"
+        cmd = "LaunchMap.py "
+        cmd += "-i %s " % self._fastaFileName
+        cmd += "-o %s " % obsFileName
+        cmd += "-c "
+        process = subprocess.Popen(cmd, shell = True)
+        process.communicate()
+        self.assertTrue(FileUtils.are2FilesIdentical(expFileName, obsFileName))
+        os.remove(obsFileName)
+        
+    def test_run(self):
+        expFileName = "%s/Tools/expLaunchMap_seqCluster1.fa.fa_aln" % os.environ["REPET_DATA"]
+        iLaunchMap = LaunchMap(self._fastaFileName)
+        iLaunchMap.setDoClean(True)
+        iLaunchMap.run()
+        self.assertTrue(FileUtils.are2FilesIdentical(expFileName, self._obsFileName))
+        
+if __name__ == "__main__":
+    unittest.main()
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