Mercurial > repos > yufei-luo > s_mart
diff commons/pyRepetUnit/hmmer/hmmOutput/tests/datas/hmmscanOutputTab.txt @ 18:94ab73e8a190
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| author | m-zytnicki |
|---|---|
| date | Mon, 29 Apr 2013 03:20:15 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/commons/pyRepetUnit/hmmer/hmmOutput/tests/datas/hmmscanOutputTab.txt Mon Apr 29 03:20:15 2013 -0400 @@ -0,0 +1,7 @@ +# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord +# target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target +#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- +rve PF00665.18 169 Polinton-1_DY:classII:Polinton_4 - 4927 5.4e-30 103.7 1.8 1 2 0.7 2.4e+03 -3.3 0.0 50 78 2742 2766 2739 2766 0.80 Integrase core domain +rve PF00665.18 169 Polinton-1_DY:classII:Polinton_4 - 4927 5.4e-30 103.7 1.8 2 2 1.9e-33 6.7e-30 103.4 0.7 4 168 2951 3101 2947 3102 0.92 Integrase core domain +Chromo PF00385.16 69 Polinton-1_DY:classII:Polinton_4 - 4927 3.3e-06 26.0 0.0 1 1 2.5e-09 8.5e-06 24.7 0.0 4 51 3198 3228 3195 3239 0.75 'chromo' (CHRromatin Organisation MOdifier) domain +GARS_A PF01071.11 208 Polinton-1_DY:classII:Polinton_4 - 4927 7.6 3.0 0.7 1 1 0.0031 11 2.5 0.5 196 204 2117 2125 2117 2125 0.95 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain \ No newline at end of file