Mercurial > repos > yufei-luo > s_mart
view smart_toolShed/SMART/galaxy/ConvertTranscriptFile_BlastToCsv.xml @ 1:30c5431d8ce4
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author | yufei-luo |
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date | Thu, 17 Jan 2013 11:01:51 -0500 |
parents | e0f8dcca02ed |
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<tool id="ConvertTranscriptFile_BlastToCsv" name="Blast (-m 8) -> Csv"> <description>Convert Blast (-m 8) File to Csv File.</description> <command interpreter="python"> ../Java/Python/convertTranscriptFile.py -i $inputFile -f blast -o $outputFile -g csv yes 2>$logFile </command> <inputs> <param name="inputFile" type="data" label="Input File" format="tabular"/> </inputs> <outputs> <data format="csv" name="outputFile" label="[blast -> csv] Output File"/> <data format="txt" name="logFile" label="[blast -> csv] Log File"/> </outputs> <help> </help> </tool>