Mercurial > repos > yufei-luo > s_mart

view SMART/galaxy/FindOverlaps_optim.xml @ 15:440ceca58672

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author m-zytnicki
date Mon, 22 Apr 2013 11:08:07 -0400
parents 769e306b7933
children
line wrap: on
line source

<tool id="findOverlaps" name="findOverlaps">
	<description>Finds the overlapped reference reads.</description>
	<command interpreter="python">
		../Java/Python/FindOverlaps_optim.py -i $inputRef -j $inputQ -o $outputFileGff 
	</command>
	
  <inputs>
    <param name="inputRef" type="data" label="Input Reference File" format="gff3"/>
    <param name="inputQ" type="data" label="Input Query File" format="gff3"/>
  </inputs>

	<outputs>
		<data name="outputFileGff" format="gff3"/>
	</outputs> 
	
</tool>