<tool id="qualToFastq" name="qual -> Fastq">
  <description>Convert a file in FASTA/Qual format to FastQ format.</description>
  <command interpreter="python"> ../Java/Python/qualToFastq.py -f $inputFastaFile -q $inputQualFile -o $outputFile </command>
  <inputs>
    <param name="inputFastaFile" type="data" label="Input fasta File" format="fasta"/>
    <param name="inputQualFile" type="data" label="Input qual File" format="txt"/>
  </inputs>

  <outputs>
    <data format="fastq" name="outputFile" label="[qual -> Fastq] Output File"/>
  </outputs>

  <help>
  </help>
</tool>