Mercurial > repos > yufei-luo > s_mart

directory /SMART/galaxy/ @ 34:529e3e6a0954

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dir. test/ drwxr-xr-x
file CleanTranscriptFile.xml 2219 -rwxr-xr-x
file Clusterize.xml 2760 -rwxr-xr-x
file CollapseReads.xml 1946 -rwxr-xr-x
file CompareOverlappingSmallQuery.xml 6411 -rwxr-xr-x
file CompareOverlappingSmallRef.xml 6417 -rwxr-xr-x
file ConvertTranscriptFile.xml 4041 -rwxr-xr-x
file ConvertTranscriptFile_BedToCsv.xml 559 -rwxr-xr-x
file ConvertTranscriptFile_BedToGff2.xml 564 -rwxr-xr-x
file ConvertTranscriptFile_BedToGff3.xml 566 -rwxr-xr-x
file ConvertTranscriptFile_BedToSam.xml 559 -rwxr-xr-x
file ConvertTranscriptFile_BlastToCsv.xml 589 -rwxr-xr-x
file ConvertTranscriptFile_BlastToGff2.xml 595 -rwxr-xr-x
file ConvertTranscriptFile_BlastToGff3.xml 596 -rwxr-xr-x
file ConvertTranscriptFile_BlastToSam.xml 589 -rwxr-xr-x
file ConvertTranscriptFile_FastqToFasta.xml 556 -rwxr-xr-x
file ConvertTranscriptFile_Gff2ToCsv.xml 565 -rwxr-xr-x
file ConvertTranscriptFile_Gff2ToGff3.xml 572 -rwxr-xr-x
file ConvertTranscriptFile_Gff2ToSam.xml 565 -rwxr-xr-x
file ConvertTranscriptFile_Gff3ToCsv.xml 566 -rwxr-xr-x
file ConvertTranscriptFile_Gff3ToGff2.xml 572 -rwxr-xr-x
file ConvertTranscriptFile_Gff3ToSam.xml 566 -rwxr-xr-x
file ConvertTranscriptFile_Gff3ToWig.xml 565 -rwxr-xr-x
file ConvertTranscriptFile_SamToCsv.xml 559 -rwxr-xr-x
file ConvertTranscriptFile_SamToGff2.xml 565 -rwxr-xr-x
file ConvertTranscriptFile_SamToGff3.xml 566 -rwxr-xr-x
file CountReadGCPercent.xml 615 -rwxr-xr-x
file DiffExpAnal.xml 1193 -rwxr-xr-x
file FindOverlaps_optim.xml 503 -rwxr-xr-x
file GetDifferentialExpression.xml 7149 -rwxr-xr-x
file GetFlanking.xml 5259 -rwxr-xr-x
file SelectByTag.xml 3750 -rwxr-xr-x
file WrappGetLetterDistribution.py 3620 -rwxr-xr-x
file WrappGetLetterDistribution.xml 1694 -rwxr-xr-x
file __init__.py 0 -rwxr-xr-x
file changeGffFeatures.xml 824 -rwxr-xr-x
file changeTagName.xml 1655 -rwxr-xr-x
file cleanGff.xml 681 -rwxr-xr-x
file clusterize.xml 2619 -rwxr-xr-x
file clusterizeBySlidingWindows.xml 4865 -rwxr-xr-x
file compareOverlapping.xml 9579 -rwxr-xr-x
file computeCoverage.xml 3552 -rwxr-xr-x
file coordinatesToSequence.xml 1986 -rwxr-xr-x
file findTss.xml 2189 -rwxr-xr-x
file getDifference.xml 4093 -rwxr-xr-x
file getDistance.xml 9339 -rwxr-xr-x
file getDistribution.xml 7431 -rwxr-xr-x
file getExons.xml 2570 -rwxr-xr-x
file getIntrons.xml 2045 -rwxr-xr-x
file getNb.xml 2512 -rwxr-xr-x
file getReadDistribution.xml 2173 -rwxr-xr-x
file getSequence.xml 578 -rwxr-xr-x
file getSizes.xml 4296 -rwxr-xr-x
file getWigData.xml 971 -rwxr-xr-x
file getWigDistance.xml 1053 -rwxr-xr-x
file getWigProfile.xml 2322 -rwxr-xr-x
file mapperAnalyzer.xml 5852 -rwxr-xr-x
file mappingToCoordinates.xml 1834 -rwxr-xr-x
file mergeSlidingWindowsClusters.xml 3346 -rwxr-xr-x
file mergeTranscriptLists.xml 4726 -rwxr-xr-x
file modifyFasta.xml 1298 -rwxr-xr-x
file modifyGenomicCoordinates.xml 3641 -rwxr-xr-x
file modifySequenceList.xml 1269 -rwxr-xr-x
file plot.xml 2608 -rwxr-xr-x
file plotCoverage.xml 8034 -rwxr-xr-x
file plotGenomeCoverage.xml 1936 -rwxr-xr-x
file plotRepartition.xml 1987 -rwxr-xr-x
file plotTranscriptList.xml 4253 -rwxr-xr-x
file qualToFastq.xml 580 -rwxr-xr-x
file removeExonLines.sh 29 -rwxr-xr-x
file removeExonLines.xml 501 -rwxr-xr-x
file restrictFromSize.xml 2918 -rwxr-xr-x
file restrictSequenceList.xml 660 -rwxr-xr-x
file restrictTranscriptList.xml 3541 -rwxr-xr-x
file testArgum.xml 957 -rwxr-xr-x
file testR.xml 1201 -rwxr-xr-x
file trimAdaptor.xml 1612 -rwxr-xr-x
file trimSequences.xml 3017 -rwxr-xr-x