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[up]
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drwxr-xr-x |
 Wig/
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drwxr-xr-x |
 SR1.fastq
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164698 |
-rwxr-xr-x |
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adress.txt
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25 |
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clusterize_default_expected.gff3
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157276 |
-rwxr-xr-x |
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clusterize_default_expected.map
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58102 |
-rwxr-xr-x |
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clusterize_normalize_expected.gff3
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157276 |
-rwxr-xr-x |
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clusterize_output_tag_expected.gff3
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173414 |
-rwxr-xr-x |
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clusterize_strands_expected.gff3
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316725 |
-rwxr-xr-x |
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expOutputGff.gff3
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475733 |
-rwxr-xr-x |
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expRef.fasta
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2008403 |
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inputCR.gff3
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956 |
-rwxr-xr-x |
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inputFileTest1.bed
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282 |
-rwxr-xr-x |
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inputFileTest2.bed
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147 |
-rwxr-xr-x |
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inputMSWC1.gff3
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823 |
-rwxr-xr-x |
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inputMSWC2.gff3
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823 |
-rwxr-xr-x |
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inputMTC.sam
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541308 |
-rwxr-xr-x |
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inputMapping.map
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876 |
-rwxr-xr-x |
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mapperAnalyzerExpected.gff3
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650 |
-rwxr-xr-x |
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mapperAnalyzerMappings.axt
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433 |
-rwxr-xr-x |
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mapperAnalyzerOutput.gff3
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649 |
-rwxr-xr-x |
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mapperAnalyzerSequences.mfq
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226 |
-rwxr-xr-x |
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sorted_file_oneline.gff3
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57 |
-rwxr-xr-x |
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sorted_query.gff3
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356 |
-rwxr-xr-x |
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sorted_query_wig.wig
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6347 |
-rwxr-xr-x |
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sorted_ref.gff3
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407 |
-rwxr-xr-x |
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testBedParser1.bed
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136 |
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testC2S.fa
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5155 |
-rwxr-xr-x |
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testC2S.gff3
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131 |
-rwxr-xr-x |
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testCompareTranscriptListDistanceAntisense1.gff3
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61 |
-rwxr-xr-x |
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testCompareTranscriptListDistanceAntisense2.gff3
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122 |
-rwxr-xr-x |
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testCompareTranscriptListDistanceSimple1.gff3
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61 |
-rwxr-xr-x |
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testCompareTranscriptListDistanceSimple2.gff3
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122 |
-rwxr-xr-x |
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testDifferentialExpressionExpected.gff3
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260 |
-rwxr-xr-x |
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testDifferentialExpressionOutput.gff3
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260 |
-rwxr-xr-x |
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testDifferentialExpressionReference.gff3
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104 |
-rwxr-xr-x |
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testDifferentialExpressionSample1.gff3
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146 |
-rwxr-xr-x |
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testDifferentialExpressionSample2.gff3
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146 |
-rwxr-xr-x |
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testGffParser1.gff3
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565 |
-rwxr-xr-x |
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testPlot.gff3
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342 |
-rwxr-xr-x |
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testSW.gff3
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170 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptList1.bed
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217 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptList2.bed
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54 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptListGetDifference1.gff3
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89 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptListGetDifference2.gff3
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74 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptListMergeAggregation1.bed
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136 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptListMergeAggregation2.bed
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68 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptListMergeSenseAntiSenseAway1.bed
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470 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptListMergeSenseAntiSenseAway1_modif.bed
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7536 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptListMergeSenseAntiSenseAway2.bed
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132 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptListMergeSimple1.bed
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54 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptListMergeSimple2.bed
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54 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptListSelfMerge1.gff3
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329 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptListSelfMergeDifferentClusters1.bed
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111 |
-rwxr-xr-x |
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testTranscriptListsComparatorCompareTranscriptListSelfMergeSense1.bed
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128 |
-rwxr-xr-x |
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testTranscriptNormalize.gff3
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140 |
-rwxr-xr-x |
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test_distance.bed
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152 |
-rwxr-xr-x |
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test_minoverlapp.bed
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343 |
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