Mercurial > repos > yufei-luo > s_mart
view SMART/galaxy/cleanGff.xml @ 10:c081f25e1572
Updated CompareOverlappingSmallRef.py
author | m-zytnicki |
---|---|
date | Thu, 14 Mar 2013 05:25:40 -0400 |
parents | 769e306b7933 |
children | 440ceca58672 |
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<tool id="cleanGff" name="clean Gff"> <description>Cleans a GFF file as given by NCBI and outpus a Gff3 file.</description> <command interpreter="python"> ../Java/Python/cleanGff.py -i $inputFile -t $type -o $outputFile </command> <inputs> <param name="inputFile" type="data" label="Input File" format="gff"/> <param name="type" type="text" value="tRNA,rRNA,ncRNA,CDS" label="tag option, compulsory option" help="lists of comma separated types that you want to keep.EX: ncRNA,tRNA,rRNA,CDS"/> </inputs> <outputs> <data format="gff3" name="outputFile" label="[cleanGff] Output File"/> </outputs> </tool>