# HG changeset patch
# User ziru-zhou
# Date 1355840827 18000
# Node ID 671c4c5ce125260676c1d56d48e7dfaf7ca875fa
# Parent  ca317b7c8d98e15d5ca5c647e2eb1053d6de333c
Uploaded

diff -r ca317b7c8d98 -r 671c4c5ce125 tool_dependencies.xml
--- a/tool_dependencies.xml	Tue Dec 18 09:20:50 2012 -0500
+++ b/tool_dependencies.xml	Tue Dec 18 09:27:07 2012 -0500
@@ -6,7 +6,7 @@
     <package name="samtools" version="0.1.12">
         <install version="1.0">
             <actions>
-                <action type="download_by_url">https://github.com/modENCODE-DCC/Galaxy/blob/master/tool_shed_dependencies/bamedit/samtoolspkg.tar</action>
+                <action type="shell_command">git clone https://github.com/modENCODE-DCC/Galaxy/blob/master/tool_shed_dependencies/bamedit/samtoolspkg.tar</action>
                 <action type="shell_command">chmod ago+x samtools</action>
                 <action type="shell_command">chmod ago+x maq2sam-long</action>
                 <action type="move_file">