Bwa-mem2 is the next version of the bwa-mem algorithm in bwa. It produces alignment identical to bwa and is ~1.3-3.1x faster depending on the use-case, dataset and the running machine. |
hg clone https://radegast.galaxyproject.org/repos/iuc/bwa_mem2
Name | Description | Version | Minimum Galaxy Version |
---|---|---|---|
- map medium and long reads (> 100 bp) against reference genome | 2.2.1+galaxy4 | 24.2 | |
Build BWA-MEM2 reference index | 2.2.1+galaxy4 | 20.01 |