Mercurial > repos > abaizan > kodoja
comparison test-data/kaiju_databases.loc @ 0:18fe33eb7775 draft
Uploaded kodoja_search.py v0.0.3 wrapper.
https://github.com/abaizan/kodoja_galaxy/commit/55004d41a9c0750b2543f394594ee58cc4426609
| author | peterjc |
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| date | Wed, 14 Mar 2018 12:46:57 -0400 |
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| -1:000000000000 | 0:18fe33eb7775 |
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| 1 # This is a tab-separated file listing any Kaiju databases | |
| 2 # available local for tool wrapper tests. | |
| 3 # | |
| 4 # - Column 1 - value, the key which Galaxy will record in DB | |
| 5 # - Column 2 - name, the text caption which Galaxy show users | |
| 6 # - Column 3 - path, the directory name (which will contain | |
| 7 # files named ``kaiju_library.fmi``, ``names.dmp`` and | |
| 8 # ``nodes.dmp`` (the later being NCBI taxonomy files). | |
| 9 # | |
| 10 # e.g. | |
| 11 # | |
| 12 # plants_dec_2017(tab)Plants (December 2017)(tab)/mnt/shared/kaiju_db/plants_2017_12/ | |
| 13 # | |
| 14 kaiju3viruses Sample databse using k18 m5 and three viruses ${__HERE__}/kaijuDB_test |