Mercurial > repos > abaizan > kodoja
changeset 0:18fe33eb7775 draft
Uploaded kodoja_search.py v0.0.3 wrapper.
https://github.com/abaizan/kodoja_galaxy/commit/55004d41a9c0750b2543f394594ee58cc4426609
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/LICENSE Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,23 @@ +MIT License + +Copyright 2018 by Amanda Baizan Edge (University of St Andrews, and The James +Hutton Institute). +Copyright 2018 by Peter Cock (The James Hutton Institute). + +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the "Software"), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in all +copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE +SOFTWARE.
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.rst Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,115 @@ +.. image:: https://travis-ci.org/abaizan/kodoja_galaxy.svg?branch=master + :alt: Linux testing with TravisCI + :target: https://travis-ci.org/abaizan/kodoja_galaxy/branches + +This is a Galaxy wrapper for the tool Kodoja, which is available to install in +conda from bioconda. + +https://github.com/abaizan/kodoja + +Galaxy wrappers for Kodoja +========================== + +These wrappers are copyright 2018 by Amanda Baizan Edge (University of +St Andrews, and The James Hutton Institute) and Peter Cock (The James +Hutton Institute). They are released under the MIT licence. + +These wrappers are available from the Galaxy Tool Shed at: +http://toolshed.g2.bx.psu.edu/view/abaizan/kodoja + +In-development test releases are available from the Test Tool Shed at: +http://testtoolshed.g2.bx.psu.edu/view/abaizan/kodoja + + +Citation +======== + +Please refer to the main Kodoja citation instructions. + + +Automated Installation +====================== + +Galaxy should be able to automatically install the dependencies, namely +``kodoja`` and its dependencies like ``kraken`` and ``kaiju``, using the +conda and the bioconda recipes. + +See the configuration notes below. + + +Configuration +============= + +You must tell Galaxy about any Kraken and Kaiju databases using configuration +files ``kraken_databases.loc`` and ``kaiju_databases.loc`` which are located +in the ``tool-data/`` folder. Sample files are included which explain the +tab-based format to use. + + +History +======= + +======= ====================================================================== +Version Changes +------- ---------------------------------------------------------------------- +v0.0.0 - Initial release covering ``kodoja_search.py`` v0.0.3. +======= ====================================================================== + + +Bug Reports +=========== + +File a Galaxy wrapper issue at https://github.com/abaizan/kodoja_galaxy/issues + +For issues with Kodoja itself, use https://github.com/abaizan/kodoja/issues + + +Developers +========== + +For pushing a release to the test or main "Galaxy Tool Shed", use the +following Planemo commands (which requires you have set your Tool Shed access +details in ``~/.planemo.yml`` and that you have access rights on the Tool +Shed):: + + $ planemo shed_update -t testtoolshed --check_diff . + ... + +or:: + + $ planemo shed_update -t toolshed --check_diff . + ... + +To just build and check the tar ball, use:: + + $ planemo shed_upload -t testtoolshed --tar_only . + ... + $ tar -tzf shed_upload.tar.gz + LICENSE + README.rst + ... + +This simplifies ensuring a consistent set of files is bundled each time, +including all the relevant test files. + + +Licence (MIT) +============= + +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the "Software"), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in +all copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN +THE SOFTWARE.
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/kodoja_search.xml Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,180 @@ +<tool id="kodoja_search" name="Kodoja database search" version="0.0.0"> + <description>identify viruses from plant RNA sequencing data</description> + <requirements> + <requirement type="package" version="0.0.3">kodoja</requirement> + </requirements> + <version_command>kodoja_search.py --version</version_command> + <command detect_errors="exit_code"><![CDATA[ +kodoja_search.py + +--kraken_db '${kraken_db.fields.path}' +--kaiju_db '${kaiju_db.fields.path}' + +#if $single_paired.single_paired_selector == 'yes' + #if $forward_input.is_of_type( 'fastq' ): + --data_format fastq + #else: + --data_format fasta + #end if + --read1 '${single_paired.forward_input}' + --read2 '${single_paired.reverse_input}' +#else: + #if $single_paired.input_sequences.is_of_type('fastq') + --data_format fastq + #else: + --data_format fasta + #end if + --read1 '${single_paired.input_sequences}' +#end if + +## TODO: +## -m min_trim +## -a trim_adapt +## -q kraken_quick +## -p kraken_preload +## -c kaiju_score +## -l kaiju_minlen +## -i kaiju_mismatch + +## We'll capture predictably named output files from here: +-o . +&& +mv ./virus_table.txt '$combined_table' +]]></command> + <inputs> + <param label="Select a Kraken database" name="kraken_db" type="select"> + <options from_data_table="kraken_databases"> + <validator message="No Kraken database is available" type="no_options" /> + </options> + </param> + <param label="Select a Kaiju database" name="kaiju_db" type="select"> + <options from_data_table="kaiju_databases"> + <validator message="No Kaiju database is available" type="no_options" /> + </options> + </param> + <conditional name="single_paired"> + <param name="single_paired_selector" type="select" label="Single or paired reads" help="--paired"> + <!-- TODO? + <option value="collection">Collection</option> + --> + <option value="yes">Paired</option> + <option selected="True" value="no">Single</option> + </param> + <when value="yes"> + <param format="fasta,fastq" name="forward_input" type="data" label="Forward strand" help="FASTA or FASTQ dataset"/> + <param format="fasta,fastq" name="reverse_input" type="data" label="Reverse strand" help="FASTA or FASTQ dataset"/> + </when> + <when value="no"> + <param format="fasta,fastq" label="Input sequences" name="input_sequences" type="data" help="FASTA or FASTQ datasets"/> + </when> + </conditional> + </inputs> + <outputs> + <data name="combined_table" format="tabular" label="Kodoja species report for ${on_string}" /> + </outputs> + <tests> + <test> + <param name="kraken_db" value="kraken3viruses" /> + <param name="kaiju_db" value="kaiju3viruses" /> + <param name="single_paired_selector" value="no" /> + <param name="input_sequences" value="testData_1.fastq" ftype="fastq" /> + <output name="combined_table" file="virus_table_SE_fastq.tabular" ftype="tabular" /> + </test> + <test> + <param name="kraken_db" value="kraken3viruses" /> + <param name="kaiju_db" value="kaiju3viruses" /> + <param name="single_paired_selector" value="yes" /> + <param name="forward_input" value="testData_1.fastq" ftype="fastq" /> + <param name="reverse_input" value="testData_2.fastq" ftype="fastq" /> + <output name="combined_table" file="virus_table_PE_fastq.tabular" ftype="tabular" /> + </test> + <test> + <param name="kraken_db" value="kraken3viruses" /> + <param name="kaiju_db" value="kaiju3viruses" /> + <param name="single_paired_selector" value="yes" /> + <param name="forward_input" value="testData_1.fasta" ftype="fasta" /> + <param name="reverse_input" value="testData_2.fasta" ftype="fasta" /> + <output name="combined_table" file="virus_table_PE_fasta.tabular" ftype="tabular" /> + </test> + </tests> + <help><![CDATA[ +Kodoja is a tool intended to identify viral sequences in a +FASTQ/FASTA sequencing run by matching them against both +Kraken and Kaiju databases. + +The main output is a five column tab-separated table as follows +(tabular format in Galaxy): + +1. Species name +2. Species NCBI taxonomy identifier (TaxID) +3. Number of reads assigned by *either* Kraken or Kaiju to this species +4. Number of Reads assigned by *both* Kraken and Kaiju to this species +5. Genus name +6. Number of reads assigned by *either* Kraken or Kaiju to this genus +7. Number of reads assigned by *both* Kraken and Kaiju to this genus + +For example, + +================================== ============= ================= ============================= ========== =============== =========================== +Species Species TaxID Species sequences Species sequences (stringent) Genus Genus sequences Genus sequences (stringent) +---------------------------------- ------------- ----------------- ----------------------------- ---------- --------------- --------------------------- +Cassava brown streak virus 137758 45 45 Ipomovirus +Ugandan cassava brown streak virus 946046 28 28 Ipomovirus +Tobacco etch virus 12227 21 19 Potyvirus +================================== ============= ================= ============================= ========== =============== =========================== + +This is the command line tool's help:: + + usage: kodoja_search.py [-h] [--version] -o OUTPUT_DIR -d1 KRAKEN_DB -d2 + KAIJU_DB -r1 READ1 [-r2 READ2] [-f DATA_FORMAT] + [-t THREADS] [-s] [-m TRIM_MINLEN] [-a TRIM_ADAPT] + [-q KRAKEN_QUICK] [-p] [-c KAIJU_SCORE] + [-l KAIJU_MINLEN] [-i KAIJU_MISMATCH] + + Kodoja + + optional arguments: + -h, --help show this help message and exit + --version show program's version number and exit + -o OUTPUT_DIR, --output_dir OUTPUT_DIR + Output directory path, required + -d1 KRAKEN_DB, --kraken_db KRAKEN_DB + Kraken database path, required + -d2 KAIJU_DB, --kaiju_db KAIJU_DB + Kaiju database path, required + -r1 READ1, --read1 READ1 + Read 1 file path, required + -r2 READ2, --read2 READ2 + Read 2 file path + -f DATA_FORMAT, --data_format DATA_FORMAT + Sequence data format + -t THREADS, --threads THREADS + Number of threads + -s, --host_subset Subset host sequences before Kaiju + -m TRIM_MINLEN, --trim_minlen TRIM_MINLEN + Trimmomatic minimum length + -a TRIM_ADAPT, --trim_adapt TRIM_ADAPT + Illumina adapter sequence file + -q KRAKEN_QUICK, --kraken_quick KRAKEN_QUICK + Number of minium hits by Kraken + -p, --kraken_preload Kraken preload database + -c KAIJU_SCORE, --kaiju_score KAIJU_SCORE + Kaju alignment score + -l KAIJU_MINLEN, --kaiju_minlen KAIJU_MINLEN + Kaju minimum length + -i KAIJU_MISMATCH, --kaiju_mismatch KAIJU_MISMATCH + Kaju allowed mismatches + + ]]></help> + <citations> + <citation type="bibtex"> +@misc{githubkodoja, + author = {Baizan Edge, Amanda}, + year = {2018}, + title = {Kodoja}, + publisher = {GitHub}, + journal = {GitHub repository}, + url = {https://github.com/abaizan/kodoja}, +}</citation> + </citations> +</tool>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/kaijuDB_test/names.dmp Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,18 @@ +1 | all | | synonym | +1 | root | | scientific name | +10239 | Vira | | synonym | +10239 | Viridae | | synonym | +10239 | Viruses | | scientific name | +10239 | viruses | viruses<blast10239> | blast name | +12195 | Potyvirus | | scientific name | +12227 | TEV | | acronym | +12227 | Tobacco etch virus | | scientific name | +12227 | tobacco etch potyvirus | | synonym | +35278 | ssRNA positive-strand viruses, no DNA stage | | scientific name | +39729 | Potyviridae | | scientific name | +137757 | Ipomovirus | | scientific name | +137758 | Cassava brown streak virus | | scientific name | +439488 | ssRNA viruses | | scientific name | +946046 | Cassava brown streak Uganda virus | | synonym | +946046 | UCBSV | | acronym | +946046 | Ugandan cassava brown streak virus | | scientific name |
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/kaijuDB_test/nodes.dmp Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,10 @@ +1 | 1 | no rank | | 8 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | | +10239 | 1 | superkingdom | | 9 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | | +12195 | 39729 | genus | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +12227 | 12195 | species | TE | 9 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | | +35278 | 439488 | no rank | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +39729 | 35278 | family | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +137757 | 39729 | genus | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +137758 | 137757 | species | CB | 9 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | | +439488 | 10239 | no rank | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +946046 | 137757 | species | UC | 9 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | |
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/kaiju_databases.loc Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,14 @@ +# This is a tab-separated file listing any Kaiju databases +# available local for tool wrapper tests. +# +# - Column 1 - value, the key which Galaxy will record in DB +# - Column 2 - name, the text caption which Galaxy show users +# - Column 3 - path, the directory name (which will contain +# files named ``kaiju_library.fmi``, ``names.dmp`` and +# ``nodes.dmp`` (the later being NCBI taxonomy files). +# +# e.g. +# +# plants_dec_2017(tab)Plants (December 2017)(tab)/mnt/shared/kaiju_db/plants_2017_12/ +# +kaiju3viruses Sample databse using k18 m5 and three viruses ${__HERE__}/kaijuDB_test
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/krakenDB_test/log_file.txt Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,4 @@ +output_dir = test/example_db/ +kraken_kmer = 18 +kraken_minimizer = 5 +Genomes added to db = ['GCF_000861345.1', 'GCF_000884835.1', 'GCF_000888855.1']
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/krakenDB_test/taxonomy/names.dmp Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,18 @@ +1 | all | | synonym | +1 | root | | scientific name | +10239 | Vira | | synonym | +10239 | Viridae | | synonym | +10239 | Viruses | | scientific name | +10239 | viruses | viruses<blast10239> | blast name | +12195 | Potyvirus | | scientific name | +12227 | TEV | | acronym | +12227 | Tobacco etch virus | | scientific name | +12227 | tobacco etch potyvirus | | synonym | +35278 | ssRNA positive-strand viruses, no DNA stage | | scientific name | +39729 | Potyviridae | | scientific name | +137757 | Ipomovirus | | scientific name | +137758 | Cassava brown streak virus | | scientific name | +439488 | ssRNA viruses | | scientific name | +946046 | Cassava brown streak Uganda virus | | synonym | +946046 | UCBSV | | acronym | +946046 | Ugandan cassava brown streak virus | | scientific name |
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/krakenDB_test/taxonomy/nodes.dmp Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,10 @@ +1 | 1 | no rank | | 8 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | | +10239 | 1 | superkingdom | | 9 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | | +12195 | 39729 | genus | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +12227 | 12195 | species | TE | 9 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | | +35278 | 439488 | no rank | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +39729 | 35278 | family | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +137757 | 39729 | genus | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +137758 | 137757 | species | CB | 9 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | | +439488 | 10239 | no rank | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +946046 | 137757 | species | UC | 9 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | |
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/kraken_databases.loc Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,15 @@ +# This is a tab-separated file listing any Kraken databases +# available locally for tool wrapper tests. +# +# - Column 1 - value, the key which Galaxy will record in DB +# - Column 2 - name, the text caption which Galaxy show users +# - Column 3 - path, the directory name (which will contain +# files named ``database.idx``, ``database.kdb`` and a +# sub-directory named taxonomy containing files from the +# NCBI named ``names.dmp`` and ``nodes.dmp`` +# +# e.g. +# +# plants_dec_2017(tab)Plants (December 2017)(tab)/mnt/shared/kraken_db/plants_2017_12/ +# +kraken3viruses Sample databse using k18 m5 and three viruses ${__HERE__}/krakenDB_test
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/taxonomy/names.dmp Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,18 @@ +1 | all | | synonym | +1 | root | | scientific name | +10239 | Vira | | synonym | +10239 | Viridae | | synonym | +10239 | Viruses | | scientific name | +10239 | viruses | viruses<blast10239> | blast name | +12195 | Potyvirus | | scientific name | +12227 | TEV | | acronym | +12227 | Tobacco etch virus | | scientific name | +12227 | tobacco etch potyvirus | | synonym | +35278 | ssRNA positive-strand viruses, no DNA stage | | scientific name | +39729 | Potyviridae | | scientific name | +137757 | Ipomovirus | | scientific name | +137758 | Cassava brown streak virus | | scientific name | +439488 | ssRNA viruses | | scientific name | +946046 | Cassava brown streak Uganda virus | | synonym | +946046 | UCBSV | | acronym | +946046 | Ugandan cassava brown streak virus | | scientific name |
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/taxonomy/nodes.dmp Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,10 @@ +1 | 1 | no rank | | 8 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | | +10239 | 1 | superkingdom | | 9 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | | +12195 | 39729 | genus | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +12227 | 12195 | species | TE | 9 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | | +35278 | 439488 | no rank | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +39729 | 35278 | family | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +137757 | 39729 | genus | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +137758 | 137757 | species | CB | 9 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | | +439488 | 10239 | no rank | | 9 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | | +946046 | 137757 | species | UC | 9 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | |
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/testData_1.fasta Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,200 @@ +>SRR3466597.2160184/1 +TTGAGTTTCACGGGAAACTGAGTTGTGAATTCAACTTCTCTACCTGGTGGTGTGGCTGACACTTTGAGGACTTTTCCTTCAAATTCATGTTCAAACAG +>SRR3466597.1867187/1 +TCTATAATGTGGCTTCACGTTGCCTCGGCTGATTTGGTTGTTCCACCATTGCTTAAAAGTGACTCCAGGAAGGCTCGTCTTG +>SRR3466597.1714296/1 +TCCCTTCAGGAGTTCCAAGTGGAACTTGAAAAGCGATTTCACAGACAAGTCTATATGTCCGCCGCAATCTACGGTGTTTTTCATGATTAAAGGCTTTCGC +>SRR3466597.979054/1 +CCGACCGCGTACAATGAACATACCATGTCGATACCAATGCGCAGGTCCGTACGAGCCTTGCCTCAAAACTAGGCCACTTGAACCAAAAGTGAGCTTCGAT +>SRR3466597.1842453/1 +GTGAAATTCGATGCTGAGTGTATACCAACAATGAACCCATCTCTAGTTGATACTAATGGACTGCCACACTGCCCATCCTTGGTTTGAATCCAATGCTTCC +>SRR3466597.1967334/1 +CCTTTAATCATGAAAAACACCGTAGATTGCGGCGGACATATAGACTTGTCTGTGAAATCGCTTTTCAAG +>SRR3466597.881543/1 +TTGACTGCATGATAAGGGCACACCGAGAGGCGAAGGTTGCTGCACAGTTGCAGAAAGAGAGCGAGTGGGACAATATCATCAATAGAACTTTCCAGTATTC +>SRR3466597.2337588/1 +AGTTCCACGAATAAATGCTATGGCCACAAAACTTCAATATCCAAGGATGAGGGGAGAGGTGGTTGTAAACTTGAATCACCTTTTAGGATACAAGCCACAG +>SRR3466597.864405/1 +GCTATAGCAGAAGCATCATTCACATGACATTCATCAATTATGACAAAATCGTATGTTTTTACCTCAGCTATGTTTCGTGCAAAATGGTGTAAAGCGAATC +>SRR3466597.1545177/1 +ACAAAGCATGTGGTTAAAGGAAAGTGTCCCCTCTTTGAGCTCTACTTGCAGTTGAATCCAGAAAAGGAAGCATATTTTAAACCGATGATGGGAGCATATA +>SRR3466597.1972168/1 +TCAACCTTAAGAACTTTCTTCGTGCCACTATTCACCAAATAAGCATGGATTGTGGTGTGGGTGCTAAGACTTTGAGGCTCTATCTCATCGTCAATTAA +>SRR3466597.431651/1 +CGCACTACATAGGAGAATTAGACCGAGGTGACCTCACTTTGTCGTTCGCCTAAGTAATGAGACTAATAAGACATATTAAAACATATAAGATACCATTCAA +>SRR3466597.1360962/1 +TCATTAAGAAGCATAAAGGCAACAATAGCGGGCAACCTTCAACAGTGGTGGACAACACACTCATGGTCATTATTGCAATGTTATACACATGTGAGAAGTG +>SRR3466597.1276425/1 +ACTTTGAATCGCCAGAGTTGCCAATGACCAGATGTCTCTTCGTTGGATGCTTTAGATCCGAATATTGAGCCTTACCATCTTCAAGAGTAACACAACAACA +>SRR3466597.833605/1 +CACGATGTGAACCGTAACATGCACACACTATTAGGGGTCCGCCAGTGATAGTTTCTGCGTGTCTTTGCTTTCCGCTTTTAAGCTTATTGTAATATATATG +>SRR3466597.1371609/1 +GACTGTGTCAGGGTTAACCATTCGCTATCCCTAGCAATGGAAATTGTTACTATTAAGCTGGCCACCCAAGAGATGGACATGGCGT +>SRR3466597.2181878/1 +AGAGAAGTTGAATTCACAACTCAGTTTCCCGTGAAACTCAAGATAGAA +>SRR3466597.899074/1 +GCAAGAAGTTTTTCTGCTTCTTACGCTTTGGCATACTATTATGCACAAGTTGAGTGG +>SRR3466597.1751537/1 +GTCATCACTGCCTGATGCCACGCGGCAAACTGCTCATGTGTGGCTC +>SRR3466597.2102827/1 +ATGCTACAAAGCATACGAAAGAAAATATTGCAGTGCTTCAGCAGGCAAAAGATCAATTGCTAGAG +>SRR3466597.847861/1 +CTACAAGTTTATCACAGTCTCGAGTGTCCTTTCCTTGTTGTTGACATTCTTATTTCAAATTGACTGCATGATAAGGGCACACCGAGAGGCGAAGGTTGCT +>SRR3466597.1902260/1 +ACATATACTAGTATGTTGTCGCCACAACTAATCACATCGGCGTTGGCACCTGTCCCTTGTAAACTTACAAATTCCTGAA +>SRR3466597.966077/1 +TACTCTTGAAGATGGTAAGGCTCAATATTCGGATCTAAAGCATCCAACGAAGAGACATCTGGTCATTGGCAACTCTGGCGATTCAAAGTACCTAGACC +>SRR3466597.29276/1 +ATGCGCTCTTCCCTTTGTGGCTCTCTAAATTTCAGCTTTTGAGGAAATGGTGGGAAATCCTTAGGCATGCGAATAATTATCATGTCCCTCCCATCAATGA +>SRR3466597.1001991/1 +GCGTGGGGCTAGAGGGCAATATGAGGTTGCAGCGGAGCCAGAGGCGCTAGAACATTACTTTGGAAGCGCATATAATAACAAAGGAAAGCGCAAGGGCACC +>ERR996011.39031/1 +ACCTGCAGCAACACTATTCTGATACATGAGGATAGCTTGGCTAGAGAAGTTTCTCATAACCTTCCTCATAGTTGGCAATGCAAATTTGTAC +>ERR996011.157056/1 +CTTTGATGACGTGATTATGATAAACCTCGCGATTAACATAACCAACAATCATTAAGTTACCATCAATTAAT +>ERR996011.182572/1 +GTTCGGTTTTTCAGTGAGAATCCTCATTCAGCAGAATATCTTGAATCACAATGTGCCAGTGATTATATTGAGGAGAAGG +>ERR996011.250248/1 +CTCGCGTTCCACCCAGTACGTATAGAGATTTGATGAACCTATACCTAGTTTCAAACACAAACGTTCGCGCCAAGAAAATAACTCTCCGTACTGATGTTTGATGAGCTCGCGAGACATAATTTCTTG +>ERR996011.278646/1 +GACACACTCAGCTAACTTAACGATAAAGTCATCACTCATGTCCGAGCAGTACCACGGAATTTGAACTTCTTGCACATGACGTGAG +>ERR996011.296484/1 +CCTGCAGCAACACTATTCTGATACATGAGGATAGCTTGGCTAGAGAAGTTTCTCATAACCTTCCTCATAGTTGGCAATGCAAATTTGTACATTGG +>ERR996011.304884/1 +CTCTCTCTTCCCTTTGATGACGTGATTATGATAAACCTCGCGATTAACATAACCAACAATCATTAAGTTACCATCAATTAATTCTTCACCTTCATTCGCTTGCACCGTGATGGTATTAATCGCTTTTGTCATAGGGAAAAACGTTGATACTCTTGCCACGGAATTCCACTCA +>ERR996011.319320/1 +CCAGCATTTCTAGCAGCTTTTATCACAAATGCCTTACCTGCAGCAACACTATTCTGATACATGAGGATAGCTTGGCTAGAGAAGTTTCTCATAACCTTCCTCATAGTTGGCAATGCAAA +>ERR996011.335413/1 +CTCTATTCCCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAGTACGTATAGAGATTTGATGAACCTATACCTAGTTTCAAACACAAACGTTCGCGCCAAGAAAATAACTCTCCGTACTGATGTTTGATGAGCTCGCGAGACATAATTTCTTG +>ERR996011.340106/1 +CCAATTTATCAACATCTCTATTCCCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAG +>ERR996011.354526/1 +TCGGCATGAAACCTTGTTTATCTACCAAGTGAGCTGTGAATATATAATTCGCTTCAAACATGGATGCTGTCAAAGCTTGCCTCTGTGTAACACTCCTAACTGACC +>ERR996011.433744/1 +CTCAGCTAACTTAACGATAAAGTCATCACTCATGTCCGAGCAGTACCACGGAATTTGAACTTCTTGCACATGACGTGAG +>ERR996011.436007/1 +CTCAATATAATCACTGGCACATTGTGATTCAAGATATTCTGCTGAATGAGGATTCTCACTGAAAAACCGAACAAGAGATTCATAATCATCAATTCCTC +>ERR996011.526546/1 +CCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAGTACGTATAGAGATTTGATGAACCTATACCTAGTTTCAAACACAAACGTTCGCGCCAAGAAAATAACTCTCCGTACTGATGTTTGATGAGCTCGCGAGACATAATTTCTTG +>ERR996011.586857/1 +CAATTTATCAACATCTCTATTCCCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAGTACGTATAGAGATTTGATG +>ERR996011.605463/1 +ATTTTCAATACTTGTGTATCCAGCATTTCTAGCAGCTTTTATCACAAATGCCTTACCTGCAGCAACACTATTCTGATACATGAGGATAGCTTGGCTAGAGAAGTTTCTCATAACCTTCCTCATAGTTGGCAATGCAAATTTGTACA +>ERR996011.625574/1 +CAATTTATCAACATCTCTATTCCCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAG +>ERR996011.805567/1 +GGCTTCACTTCTGCTAATTTTCCCAAATTTCCTGTCACAAATGTAAC +>ERR996011.840514/1 +CTTGTGTATCCAGCATTTCTAGCAGCTTTTATCACAAATGCCTTACCTGCAGCAACACTATTCTGATACATGAGGATAGCTTGGCTAGAGAAGTTTC +>ERR996011.904946/1 +CTCTTACACACTTCTGAGACCCAATTTATCAACATCTCTATTCCCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAGTACGTATAGAGATTTGAT +>ERR996011.940698/1 +CTCTCTCTTCCCTTTGATGACGTGATTATGATAAACCTCGCGATTAACATAACCAACAATCATTAAGTTACCATCAATTAATTCTTCACCTTCATTCGCTTGCACCGTGATGGTATTAATCGCTTTTGTCATAGG +>ERR996011.972900/1 +CCCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAGTACGTATAGAGATTTGATGAACCTATACCTAGTTTCAAACACAAACGTTCGCGCCAAGAAAATAACTCTCCGTACTGATGTTTGATGAGCTCGCGAGACATAATTT +>ERR996011.1057660/1 +CCTCAATATAATCACTGGCACATTGTGATTCAAGATATTCTGCTGAATGAGGATTCTCACTGAAAAACCGAACAAGAGATTCATAATCATCA +>ERR996011.1202493/1 +CTCAGCTAACTTAACGATAAAGTCATCACTCATGTCCGAGCAGTACCACGGAATTTGAACTTCTTGCACATGACGTGAGTTATCG +>ERR996011.1221866/1 +CTCTTCTTTGTTTGCAATCCTTCATCTTTCAGTTTCTGAAGTAACTCATTTACACGCTCAACTTGTGGGGC +>ERR996011.1225250/1 +GCACATTGTGATTCAAGATATTCTGCTGAATGAGGATTCTCACTGAAAAACCGAACAAGAGATTCA +>ERR996011.1248576/1 +CTTCACTTTCCATGACAGCCTTGCAATATTCCACAACAATCATTAGTATAATAGTGTTATCGACAACTGTAGAAGGTTGTCCACTATTATTTCCA +>ERR996011.1254369/1 +ATGCCTTACCTGCAGCAACACTATTCTGATACATGAGGATAGCTTGGCTAGAGAAGTTTCTCATAACCTTCCTCATAGTTGGCAATGCAAATTTGTACATTGG +>ERR996011.1270424/1 +ACTCAGCTAACTTAACGATAAAGTCATCACTCATGTCCGAGCAGTACCACGGAATTTGAACTTCTTGCACATGACGTGAG +>ERR996011.1371856/1 +TCTCTCTCTTCCCTTTGATGACGTGATTATGATAAACCTCGCGATTAACATAACCAAC +>ERR996013.13602/1 +AGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCAT +>ERR996013.32029/1 +TGATCCTGTACGCACACGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCT +>ERR996013.75116/1 +GTTTCACTCTTTCTCTTTCCTTCCAGAGTGAGGATAGTTTTACAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGC +>ERR996013.134143/1 +TGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCATATTTATTTGAC +>ERR996013.138713/1 +ATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTG +>ERR996013.173891/1 +GATAATTTTGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTG +>ERR996013.193314/1 +CAACGTACTCCATCTTTACAAGTATGTCAACCAATGGGCTACCTTTAAGTATCATATGATCAACATATTTGTAAAATCTAGCCTTCTTCGC +>ERR996013.194974/1 +CTCCACTCACTCATGTTCGTGGCTAAGTATGTGCTACATATACCGACAGCATCTGTATGCAACAACAAGTTCTTCATCAACTCAAACACTGGACGTGGC +>ERR996013.198787/1 +GCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCA +>ERR996013.236824/1 +CGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCGTAGGAACACAAAT +>ERR996013.351799/1 +ATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGC +>ERR996013.372913/1 +GCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAG +>ERR996013.376059/1 +TCCAGAGTGAGGATAGTTTTGCAGAATCGAAACCAATGTTGATTGAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAAATAACTTCTTGTGCTTCTAACTCTCTTTTTTTATCAATGATC +>ERR996013.453686/1 +GCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCGTAGGAACACAAATTAGCACAGAA +>ERR996013.484483/1 +GGATAATTTTGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAAC +>ERR996013.489616/1 +CCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCGTAGGAACACAAATTAGC +>ERR996013.497754/1 +ATTGGTTTTGATCCTGTACGCACACGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCG +>ERR996013.515914/1 +CGGGAGAGCAAATTTGTACATTGGTTCCATAGGGTATTCTGAATCATCAATATCCTCACCCTGCGCATTTAGCTCAACAGCTCTCCAC +>ERR996013.518430/1 +TGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGC +>ERR996013.656197/1 +CTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAG +>ERR996013.656523/1 +GTCATAATTGTTATTGGTTTTGATCCTGTACGCACACGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGC +>ERR996013.692538/1 +GATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTT +>ERR996013.696477/1 +TATTGGTTTTGATCCTGTACGCACACGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCGTAGGAACACA +>ERR996013.738638/1 +GGATAATTTTGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAAC +>ERR996013.747299/1 +GCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTC +>ERR996013.752745/1 +TGTTATTGGTTTTGATCCTGTACGCACACGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCGTAGGA +>ERR996013.756913/1 +CTTGGCTGGAAAAATTTCTCATTATTTTCCTCATTGTTGGGAGAGCAAATTTGTACATTGGTTCCATAGGGTATTCTGAATCATCAATATCCTCACCCTGCGCATTTAGCTCAACAGCTCTCCACGATTT +>ERR996013.793496/1 +CAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTT +>ERR996013.804840/1 +CTTGGCTGGAAAAATTTCTCATTATTTTCCTCATTGTTGGGAGAGCAAATTTGTACATTGGTTCCATAGGGTATTCTGAATCATCA +>ERR996013.860827/1 +CAAGTATGTCAACCAATGGGCTACCTTTAAGTATCATATGATCAACATATTTGTAAAATCTAGCCTTCTTCGCATAGAGCCAAAGAGTG +>ERR996013.909965/1 +ATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCATATTTATTTGAC +>ERR996013.937909/1 +GCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCATATTTAT +>ERR996013.947899/1 +CTCCATCTTTACAAGTATGTCAACCAATGGGCTACCTTTAAGTATCATATGATCAACATATTTGTAAAATCTAGCCTTCTTCGCATAGAGCCAAAG +>ERR996013.967303/1 +CTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCATATTTA +>ERR996013.994308/1 +CTACCTTGATACAATGCTCCCATCGCTGCTTTCTTGTTGAGATCACTCAAAATCTCCATTGGATCCCACTCTGGTCCTGAATTCCCA +>ERR996013.1066941/1 +CATCTTTACAAGTATGTCAACCAATGGGCTACCTTTAAGTATCATATGATCAACATATTTGTAAAATCTAGCCTTCTTCGCATAGAG +>ERR996013.1134829/1 +TGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTT +>ERR996013.1154101/1 +CAAGTATGTCAACCAATGGGCTACCTTTAAGTATCATATGATCAACATATTTGTAAAATCTAGCCTTCTTCGCATAGAGCCAAAGAG +>ERR996013.1172801/1 +TTGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTG +>ERR996013.1177982/1 +CCCTTTCCTTCCAGAGTGAGGATAGTTTTGCAGAATCGAAACCAATGTTGATTGAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAAATAACTTCTTGTGCTTCTAACTCTCTTT +>ERR996013.1222223/1 +CGCCGTATTGATGTTTGATGAGCTCGCGAGAAATAACTTCTTGTGCTTCTAACTCTCTTTTTTTATCAATGATCCTGTCAATGAGTT +>ERR996013.1249443/1 +CATTACACATGTATTTATATTTCATTTCAATACCTTCGTGTGCCATCACTTCTCTACAGTACTCAACCACAATCATCAGAATTATG +>ERR996013.1295292/1 +GCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCATATT +>ERR996013.1301772/1 +GTCATAATTGTTATTGGTTTTGATCCTGTACGCACACGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCG +>ERR996013.1308814/1 +TATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCATATTTATTT
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/testData_1.fastq Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,400 @@ +@SRR3466597.2160184/1 +TTGAGTTTCACGGGAAACTGAGTTGTGAATTCAACTTCTCTACCTGGTGGTGTGGCTGACACTTTGAGGACTTTTCCTTCAAATTCATGTTCAAACAG ++ +BCCFFDFFFHHHHIJJFIHIIGHGIHGIIIIIJIJIJJIGIJIJJGEBFHDG@GGDGIIGIIJJJEFHHFBDEFFDEEEEEEEDC>CDCDEDEECDBA +@SRR3466597.1867187/1 +TCTATAATGTGGCTTCACGTTGCCTCGGCTGATTTGGTTGTTCCACCATTGCTTAAAAGTGACTCCAGGAAGGCTCGTCTTG ++ +B@C=DDFFHFFFHJJJIJJIJJJJIJGGIIIGGIIIIDGH@FEHGHIJFGHIIGGIJJJ@GCHGHIEHHCHFEFDC>8==@: +@SRR3466597.1714296/1 +TCCCTTCAGGAGTTCCAAGTGGAACTTGAAAAGCGATTTCACAGACAAGTCTATATGTCCGCCGCAATCTACGGTGTTTTTCATGATTAAAGGCTTTCGC ++ +CC@DFFFFHHHHFIJJJJJGGIGJJJJJIJJJJFIHJIJJJJJIJJJJJDGIJJJJJJJJIJJJGHFFFFEDDD;;;BDDDDDDDCDFEDDDCDDDCDD@ +@SRR3466597.979054/1 +CCGACCGCGTACAATGAACATACCATGTCGATACCAATGCGCAGGTCCGTACGAGCCTTGCCTCAAAACTAGGCCACTTGAACCAAAAGTGAGCTTCGAT ++ +@@@FFFFFHFFDHIIGGIJHIJJHIBGBGGHIGHGGIEHIJDIIG=ACE=BFDCDBBCCCDCDDCDDCDCACCCC??ACC@:@BBBBDC@CCCDACDDDD +@SRR3466597.1842453/1 +GTGAAATTCGATGCTGAGTGTATACCAACAATGAACCCATCTCTAGTTGATACTAATGGACTGCCACACTGCCCATCCTTGGTTTGAATCCAATGCTTCC ++ +B@BFFFFFHHGHHJJJJJHHHIJJJIJJJJJJJJ9HIIJJJJJJJIIIJHIJJJIJJJGIJJJJJJJJJIIJJJHHHHFFFFFFEDDEEDCDCDDDDDCC +@SRR3466597.1967334/1 +CCTTTAATCATGAAAAACACCGTAGATTGCGGCGGACATATAGACTTGTCTGTGAAATCGCTTTTCAAG ++ +CCCFFFFFGHHFHII>GFHGIICFHGIII>AEGGG@AADFCDD?B@@C;@CCDCC@CCA8?9?@C:@C> +@SRR3466597.881543/1 +TTGACTGCATGATAAGGGCACACCGAGAGGCGAAGGTTGCTGCACAGTTGCAGAAAGAGAGCGAGTGGGACAATATCATCAATAGAACTTTCCAGTATTC ++ +CCCFFFFFHHHHGJJJJJIJJIIIJIJJJJGIHIJJDGIIJIJJHCHDEEHFHHFFFFEEDDDDD@BBDDBDDCDCDCDDDDCDCCCCCCDDDCC@CDDD +@SRR3466597.2337588/1 +AGTTCCACGAATAAATGCTATGGCCACAAAACTTCAATATCCAAGGATGAGGGGAGAGGTGGTTGTAAACTTGAATCACCTTTTAGGATACAAGCCACAG ++ +BCBDFFFFHHHHHJJDIJJJJJJJJJJIIJGHIJJJJJJIJJJJJJHGHHIIJJEHJIJ?CEEBFDACDEEECDDDDCDDDDDDDDACDCCDD@BDCCDD +@SRR3466597.864405/1 +GCTATAGCAGAAGCATCATTCACATGACATTCATCAATTATGACAAAATCGTATGTTTTTACCTCAGCTATGTTTCGTGCAAAATGGTGTAAAGCGAATC ++ +CCCFFFFFHHGHHIJIJJJJJHIHJJJJIJJJJIJJJJJJIIIJJJJJIHIHHJJHIJJJJGJJJIIJJEIJHIICGAHHHFFEFDFCEDEEEDABBBD< +@SRR3466597.1545177/1 +ACAAAGCATGTGGTTAAAGGAAAGTGTCCCCTCTTTGAGCTCTACTTGCAGTTGAATCCAGAAAAGGAAGCATATTTTAAACCGATGATGGGAGCATATA ++ +@C8:BDFFHHFHHHIIIIIIGIIIFHHIHIIIIIIIIGIIIIIIIIIIIIIIIIHIIIIIIIIIIGIIGIGIIHGEEEHHDC@DCCCCECCC?@BCCCCE +@SRR3466597.1972168/1 +TCAACCTTAAGAACTTTCTTCGTGCCACTATTCACCAAATAAGCATGGATTGTGGTGTGGGTGCTAAGACTTTGAGGCTCTATCTCATCGTCAATTAA ++ +@@CFFFFFHFFFHHHGIGHGIICFBFCGHIJIJIJGIGHIGGCHGGIGHGHC8E=9BFFG:5@;@@G>=EHEA?:;??CAEECCDCCC:ADBABDE>C +@SRR3466597.431651/1 +CGCACTACATAGGAGAATTAGACCGAGGTGACCTCACTTTGTCGTTCGCCTAAGTAATGAGACTAATAAGACATATTAAAACATATAAGATACCATTCAA ++ +CCCFFFFFHHGHHIIJJJIJJIJJJJJJHIJIJJIJJBIGGGIJJGIHHIJIHHFHGHHFDDDFECEDCCDDDCDDDDDDDAB@@@CDCDDDD@:>@CDD +@SRR3466597.1360962/1 +TCATTAAGAAGCATAAAGGCAACAATAGCGGGCAACCTTCAACAGTGGTGGACAACACACTCATGGTCATTATTGCAATGTTATACACATGTGAGAAGTG ++ +CCCFFFFFHGHGHGIIIIIIIIJJJJJJIJJJJJJIJJJJIJJJIFHH=FHIIJHHHHFFFFEEEB@CDDDDEFDDDDDCDDEEEDEDDDDDDEDCDDAC +@SRR3466597.1276425/1 +ACTTTGAATCGCCAGAGTTGCCAATGACCAGATGTCTCTTCGTTGGATGCTTTAGATCCGAATATTGAGCCTTACCATCTTCAAGAGTAACACAACAACA ++ +CCCFFFFFHHFHHJJIIGHGIJIJIIHIIIIEIJJJJJJJJIGGGIFIHIJIIIGIJGII?HGIJIIJJHEEHHFFEFFFEED@CED@CD<CABB??BDD +@SRR3466597.833605/1 +CACGATGTGAACCGTAACATGCACACACTATTAGGGGTCCGCCAGTGATAGTTTCTGCGTGTCTTTGCTTTCCGCTTTTAAGCTTATTGTAATATATATG ++ +@CCFFFFFHGGFFGHIIIIIJJJJIGIIJIIIIJIJJ:GHIJJIJFHIIJJJJJJJJJHEH>BEFDFECEEEEDD?BDDDDDDDDDCDCACDEEEEEEEE +@SRR3466597.1371609/1 +GACTGTGTCAGGGTTAACCATTCGCTATCCCTAGCAATGGAAATTGTTACTATTAAGCTGGCCACCCAAGAGATGGACATGGCGT ++ +@@@ABBDDFHFFFIJGFBHHHIGHIGCGGJIIIJIGGIGGDDHEHI>@DEGIFIGIHJJIJJ;CEEGHIHFEA>@@DF@@CC>>; +@SRR3466597.2181878/1 +AGAGAAGTTGAATTCACAACTCAGTTTCCCGTGAAACTCAAGATAGAA ++ +?@@DBDADDDFDFEHGIJJIIGHIHHIGGEEDFCEGGG>EHGGGIFBE +@SRR3466597.899074/1 +GCAAGAAGTTTTTCTGCTTCTTACGCTTTGGCATACTATTATGCACAAGTTGAGTGG ++ +BCCFFFFFFHHFHJIIIIJIJJJJGIIIJIJGCHCGIIJJJAFFHGIGIGHEHIGGH +@SRR3466597.1751537/1 +GTCATCACTGCCTGATGCCACGCGGCAAACTGCTCATGTGTGGCTC ++ +@@@FFFFDFFDHDGHGGDHIIGDIJBHGHIGIIFIJDIGHGGGJIG +@SRR3466597.2102827/1 +ATGCTACAAAGCATACGAAAGAAAATATTGCAGTGCTTCAGCAGGCAAAAGATCAATTGCTAGAG ++ +CCCFFFFFHHHGHJJJJJJJJJJJJJJIIJJJIJJIJJJIJIIIJIJFJ>FGIJJCGIJJIIIGH +@SRR3466597.847861/1 +CTACAAGTTTATCACAGTCTCGAGTGTCCTTTCCTTGTTGTTGACATTCTTATTTCAAATTGACTGCATGATAAGGGCACACCGAGAGGCGAAGGTTGCT ++ +CCCFFFFFHHHHHJJJJIIJJJJJHIHIIJJJIJIJIGHIHIIGJJJJJJIIJJJIGIJJJGIJJJJIGIIJIGIIHHIHHHHFFDDDDDDDBDD?CDDD +@SRR3466597.1902260/1 +ACATATACTAGTATGTTGTCGCCACAACTAATCACATCGGCGTTGGCACCTGTCCCTTGTAAACTTACAAATTCCTGAA ++ +@@;DDDDDHDADHGGIIIHIGHFEEDGGIIGHGGICDCCAFDAFGIIIIIE@HA@ECA;ACHC>@??BCEACCC>>CCC +@SRR3466597.966077/1 +TACTCTTGAAGATGGTAAGGCTCAATATTCGGATCTAAAGCATCCAACGAAGAGACATCTGGTCATTGGCAACTCTGGCGATTCAAAGTACCTAGACC ++ +@CCDFFFFFFHFHGI@GHIFGGIJIJJIGEGIGIJIGGHGCGIGIGDHIIIJIJIHIJJJIGFHGICGHIHFCHH?DCDCBBBCCCACCCCCCCDDCA +@SRR3466597.29276/1 +ATGCGCTCTTCCCTTTGTGGCTCTCTAAATTTCAGCTTTTGAGGAAATGGTGGGAAATCCTTAGGCATGCGAATAATTATCATGTCCCTCCCATCAATGA ++ +CCCFFFFFHHHHHJIJIHIIIIJJIGIJJIIJEIJGCHGJEHGIEGGIJIGIJJGGHIJIJIIGECEEHEEB<BDDACDDCDDDECCDACBDCCD:5>>: +@SRR3466597.1001991/1 +GCGTGGGGCTAGAGGGCAATATGAGGTTGCAGCGGAGCCAGAGGCGCTAGAACATTACTTTGGAAGCGCATATAATAACAAAGGAAAGCGCAAGGGCACC ++ +CCCFFFFFHHFHHIJJJIJIJJJJJJIIFJJJJJIJJIIJJGHIIEFD>CCDDDDDDDDDEDCCCDBDDBDDCEECDDDDDDCCDDDDDDDBDB?@B?@D +@ERR996011.39031/1 +ACCTGCAGCAACACTATTCTGATACATGAGGATAGCTTGGCTAGAGAAGTTTCTCATAACCTTCCTCATAGTTGGCAATGCAAATTTGTAC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.157056/1 +CTTTGATGACGTGATTATGATAAACCTCGCGATTAACATAACCAACAATCATTAAGTTACCATCAATTAAT ++ +CCCCCGGGGFFGGFFGGGGG9EEGGGGGEGGGGGEFGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGG +@ERR996011.182572/1 +GTTCGGTTTTTCAGTGAGAATCCTCATTCAGCAGAATATCTTGAATCACAATGTGCCAGTGATTATATTGAGGAGAAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.250248/1 +CTCGCGTTCCACCCAGTACGTATAGAGATTTGATGAACCTATACCTAGTTTCAAACACAAACGTTCGCGCCAAGAAAATAACTCTCCGTACTGATGTTTGATGAGCTCGCGAGACATAATTTCTTG ++ +CCCCCGGGGFFGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGFFFFGGGGFGGGGGGGGGFGAFGGGFGGGFGGGGGGGGGEGFCEGGGFGGG +@ERR996011.278646/1 +GACACACTCAGCTAACTTAACGATAAAGTCATCACTCATGTCCGAGCAGTACCACGGAATTTGAACTTCTTGCACATGACGTGAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.296484/1 +CCTGCAGCAACACTATTCTGATACATGAGGATAGCTTGGCTAGAGAAGTTTCTCATAACCTTCCTCATAGTTGGCAATGCAAATTTGTACATTGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFFGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.304884/1 +CTCTCTCTTCCCTTTGATGACGTGATTATGATAAACCTCGCGATTAACATAACCAACAATCATTAAGTTACCATCAATTAATTCTTCACCTTCATTCGCTTGCACCGTGATGGTATTAATCGCTTTTGTCATAGGGAAAAACGTTGATACTCTTGCCACGGAATTCCACTCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.319320/1 +CCAGCATTTCTAGCAGCTTTTATCACAAATGCCTTACCTGCAGCAACACTATTCTGATACATGAGGATAGCTTGGCTAGAGAAGTTTCTCATAACCTTCCTCATAGTTGGCAATGCAAA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.335413/1 +CTCTATTCCCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAGTACGTATAGAGATTTGATGAACCTATACCTAGTTTCAAACACAAACGTTCGCGCCAAGAAAATAACTCTCCGTACTGATGTTTGATGAGCTCGCGAGACATAATTTCTTG ++ +CCCCCGGGGGGFFGGGGGGGFGFGGGGGGGGGGDGGGGGGGGGGGGFFGFFGGGGGGGFFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGFGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGEGGGGFGGGGGGGFFFFCFGGGGFGGGGGGGGGGGGGGGCFGGEEFG +@ERR996011.340106/1 +CCAATTTATCAACATCTCTATTCCCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAG ++ +<CCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.354526/1 +TCGGCATGAAACCTTGTTTATCTACCAAGTGAGCTGTGAATATATAATTCGCTTCAAACATGGATGCTGTCAAAGCTTGCCTCTGTGTAACACTCCTAACTGACC ++ +CCCCCGGGGFGGGGGGEFGG9CFEGFGGGGGGGGFGGGFFFFGGGFGGGGGG>EEGGDGGGG@CFEEFFGGGGGGGGGGGDFFFFFF@C@FEGGGGGGGAFCFGG +@ERR996011.433744/1 +CTCAGCTAACTTAACGATAAAGTCATCACTCATGTCCGAGCAGTACCACGGAATTTGAACTTCTTGCACATGACGTGAG ++ +CCCCCGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGEFGGGGGGFGGGGGGGFGGGDFFGGGGGGGGGGGGGGGGGGG +@ERR996011.436007/1 +CTCAATATAATCACTGGCACATTGTGATTCAAGATATTCTGCTGAATGAGGATTCTCACTGAAAAACCGAACAAGAGATTCATAATCATCAATTCCTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.526546/1 +CCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAGTACGTATAGAGATTTGATGAACCTATACCTAGTTTCAAACACAAACGTTCGCGCCAAGAAAATAACTCTCCGTACTGATGTTTGATGAGCTCGCGAGACATAATTTCTTG ++ +CCCCCGGGGGGGGGGGGGGGGGGFGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.586857/1 +CAATTTATCAACATCTCTATTCCCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAGTACGTATAGAGATTTGATG ++ +CCCCCGGFFGGGCCGDGGCFGGGGGGFGGGDFFGGGFFFFFEEGGGGGGGFFCEGC@C@FGGGGGDGFFFFGFFFGGDCGGGEGGGGGGCGGFEFFCFGGGGAFGGCFG +@ERR996011.605463/1 +ATTTTCAATACTTGTGTATCCAGCATTTCTAGCAGCTTTTATCACAAATGCCTTACCTGCAGCAACACTATTCTGATACATGAGGATAGCTTGGCTAGAGAAGTTTCTCATAACCTTCCTCATAGTTGGCAATGCAAATTTGTACA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.625574/1 +CAATTTATCAACATCTCTATTCCCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAG ++ +CCCCCFGGFGGGFGGFGFGGGGGFCCCFFFEGGGGGGGGGGFFFCGGGGGGGGGFCGFGGCGGGGGGGFGGGGFEFGDGGGGGGGGGGCF +@ERR996011.805567/1 +GGCTTCACTTCTGCTAATTTTCCCAAATTTCCTGTCACAAATGTAAC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.840514/1 +CTTGTGTATCCAGCATTTCTAGCAGCTTTTATCACAAATGCCTTACCTGCAGCAACACTATTCTGATACATGAGGATAGCTTGGCTAGAGAAGTTTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGG +@ERR996011.904946/1 +CTCTTACACACTTCTGAGACCCAATTTATCAACATCTCTATTCCCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAGTACGTATAGAGATTTGAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.940698/1 +CTCTCTCTTCCCTTTGATGACGTGATTATGATAAACCTCGCGATTAACATAACCAACAATCATTAAGTTACCATCAATTAATTCTTCACCTTCATTCGCTTGCACCGTGATGGTATTAATCGCTTTTGTCATAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.972900/1 +CCCGGTTTGGAAATGATGCAAGAGATTGCACTCGATTTCTCTGATTGTTTTTCCTCGCGTTCCACCCAGTACGTATAGAGATTTGATGAACCTATACCTAGTTTCAAACACAAACGTTCGCGCCAAGAAAATAACTCTCCGTACTGATGTTTGATGAGCTCGCGAGACATAATTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGCFGGGFGGGGGGGGGGGGGGGGGGFGGGGGGGGCFGGGGGGGE +@ERR996011.1057660/1 +CCTCAATATAATCACTGGCACATTGTGATTCAAGATATTCTGCTGAATGAGGATTCTCACTGAAAAACCGAACAAGAGATTCATAATCATCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.1202493/1 +CTCAGCTAACTTAACGATAAAGTCATCACTCATGTCCGAGCAGTACCACGGAATTTGAACTTCTTGCACATGACGTGAGTTATCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.1221866/1 +CTCTTCTTTGTTTGCAATCCTTCATCTTTCAGTTTCTGAAGTAACTCATTTACACGCTCAACTTGTGGGGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGCFGGFGGGGGGGGGGGFGFGGGGGGFGGGGGGGGFGGGEGGG +@ERR996011.1225250/1 +GCACATTGTGATTCAAGATATTCTGCTGAATGAGGATTCTCACTGAAAAACCGAACAAGAGATTCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.1248576/1 +CTTCACTTTCCATGACAGCCTTGCAATATTCCACAACAATCATTAGTATAATAGTGTTATCGACAACTGTAGAAGGTTGTCCACTATTATTTCCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.1254369/1 +ATGCCTTACCTGCAGCAACACTATTCTGATACATGAGGATAGCTTGGCTAGAGAAGTTTCTCATAACCTTCCTCATAGTTGGCAATGCAAATTTGTACATTGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.1270424/1 +ACTCAGCTAACTTAACGATAAAGTCATCACTCATGTCCGAGCAGTACCACGGAATTTGAACTTCTTGCACATGACGTGAG ++ +@CCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.1371856/1 +TCTCTCTCTTCCCTTTGATGACGTGATTATGATAAACCTCGCGATTAACATAACCAAC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.13602/1 +AGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.32029/1 +TGATCCTGTACGCACACGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCT ++ +CCCCCGGGGGGGGEGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAFGGGGGGGGGFGGGGGGGGGGGGCGGFGGGGG +@ERR996013.75116/1 +GTTTCACTCTTTCTCTTTCCTTCCAGAGTGAGGATAGTTTTACAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGC ++ +CCCCCGGFGGGGGGGGGGGGGGGGGGFFGGGGGGGGGFGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.134143/1 +TGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCATATTTATTTGAC ++ +CCCCCGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.138713/1 +ATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTG ++ +6CCCCGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGG +@ERR996013.173891/1 +GATAATTTTGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.193314/1 +CAACGTACTCCATCTTTACAAGTATGTCAACCAATGGGCTACCTTTAAGTATCATATGATCAACATATTTGTAAAATCTAGCCTTCTTCGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.194974/1 +CTCCACTCACTCATGTTCGTGGCTAAGTATGTGCTACATATACCGACAGCATCTGTATGCAACAACAAGTTCTTCATCAACTCAAACACTGGACGTGGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.198787/1 +GCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCA ++ +CCCCCGGGGGGEGGEGFGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEAFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEFFGGGGGGGGGGFGFGGGGG +@ERR996013.236824/1 +CGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCGTAGGAACACAAAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.351799/1 +ATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.372913/1 +GCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.376059/1 +TCCAGAGTGAGGATAGTTTTGCAGAATCGAAACCAATGTTGATTGAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAAATAACTTCTTGTGCTTCTAACTCTCTTTTTTTATCAATGATC ++ +CCCCCGGGFGGFFGFGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDFGAFFGGGGGGGGGGGGGGGGEGEEFFFGGGGGGGGGGGGGGGFGGGGGGGGGGGGGFGGGGGGGGG +@ERR996013.453686/1 +GCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCGTAGGAACACAAATTAGCACAGAA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGG +@ERR996013.484483/1 +GGATAATTTTGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAAC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.489616/1 +CCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCGTAGGAACACAAATTAGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGG +@ERR996013.497754/1 +ATTGGTTTTGATCCTGTACGCACACGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCG ++ +BCCCCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGFGGEFGGGGFGGGGFGGGGGDGGGGGEGGFGGGGEGGGGGGGGGGGGGD +@ERR996013.515914/1 +CGGGAGAGCAAATTTGTACATTGGTTCCATAGGGTATTCTGAATCATCAATATCCTCACCCTGCGCATTTAGCTCAACAGCTCTCCAC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGFGGFGGGG +@ERR996013.518430/1 +TGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGC ++ +CCCCCGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.656197/1 +CTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGCFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.656523/1 +GTCATAATTGTTATTGGTTTTGATCCTGTACGCACACGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGC ++ +CCCCCFGGGGGGGGGGGGFGGGDGFGGGGGGGGGGGGGGGDGGGEGGGFFGGGGEGGGGGGGGGGGG?FGGGGGGGGGFEFFGGGGCGGGGG:DFCED>BFEG< +@ERR996013.692538/1 +GATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTT ++ +CCCCCGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGGGGGGGGGG +@ERR996013.696477/1 +TATTGGTTTTGATCCTGTACGCACACGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCGTAGGAACACA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFDGGGGGGGGGGGGGGGGGGGGGGGGGG<FGGGC +@ERR996013.738638/1 +GGATAATTTTGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAAC ++ +CCCCCGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGG@GFGGFGGGGGGGGGGGGGGGFGGGG@CFGFEGG<FGGGGGGGGGGGGGDGGGGGGGG +@ERR996013.747299/1 +GCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.752745/1 +TGTTATTGGTTTTGATCCTGTACGCACACGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCGTAGGA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGDGGG +@ERR996013.756913/1 +CTTGGCTGGAAAAATTTCTCATTATTTTCCTCATTGTTGGGAGAGCAAATTTGTACATTGGTTCCATAGGGTATTCTGAATCATCAATATCCTCACCCTGCGCATTTAGCTCAACAGCTCTCCACGATTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.793496/1 +CAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.804840/1 +CTTGGCTGGAAAAATTTCTCATTATTTTCCTCATTGTTGGGAGAGCAAATTTGTACATTGGTTCCATAGGGTATTCTGAATCATCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.860827/1 +CAAGTATGTCAACCAATGGGCTACCTTTAAGTATCATATGATCAACATATTTGTAAAATCTAGCCTTCTTCGCATAGAGCCAAAGAGTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.909965/1 +ATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCATATTTATTTGAC ++ +CCCCCFEAFFGGGFGFFGGGEDGGEG<FEGGGGGGG<FFGGGGGE@FGGGGGGGGGGGGGGGEGGGFGGGGGF9EFGGGGGGGGGGGGGGGGGGG +@ERR996013.937909/1 +GCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCATATTTAT ++ +CCCCBCF<EFGGFFCGGFFCFGGGCFGGGGG@F@FEE9EFFEGGGGAFFFCCDEGGGGGGGGE:FFDDGGGFGGDGGGFGGGFGGGGGGGGGGFG +@ERR996013.947899/1 +CTCCATCTTTACAAGTATGTCAACCAATGGGCTACCTTTAAGTATCATATGATCAACATATTTGTAAAATCTAGCCTTCTTCGCATAGAGCCAAAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.967303/1 +CTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCATATTTA ++ +CCCCCGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGG +@ERR996013.994308/1 +CTACCTTGATACAATGCTCCCATCGCTGCTTTCTTGTTGAGATCACTCAAAATCTCCATTGGATCCCACTCTGGTCCTGAATTCCCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.1066941/1 +CATCTTTACAAGTATGTCAACCAATGGGCTACCTTTAAGTATCATATGATCAACATATTTGTAAAATCTAGCCTTCTTCGCATAGAG ++ +CCCCCGGGGGGGGGGGGGGGGGEGGGEFGGFGGGGGFGGGGGGGGFGGGGGGGGGGGGFGGGGFGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.1134829/1 +TGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.1154101/1 +CAAGTATGTCAACCAATGGGCTACCTTTAAGTATCATATGATCAACATATTTGTAAAATCTAGCCTTCTTCGCATAGAGCCAAAGAG ++ +CCCCCGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.1172801/1 +TTGCAGAATCGAAACCAATGTTGATTAAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTG ++ +CCCCCGGGGGGGGGGGFGGGGGGFGGFGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGG +@ERR996013.1177982/1 +CCCTTTCCTTCCAGAGTGAGGATAGTTTTGCAGAATCGAAACCAATGTTGATTGAAAGTCGCTCTCGCAGCGAAAACAAATCGCCGTATTGATGTTTGATGAGCTCGCGAGAAATAACTTCTTGTGCTTCTAACTCTCTTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.1222223/1 +CGCCGTATTGATGTTTGATGAGCTCGCGAGAAATAACTTCTTGTGCTTCTAACTCTCTTTTTTTATCAATGATCCTGTCAATGAGTT ++ +CCCCCGGGGFFFGGGGGGGGGGGGGGGGECEGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGFGGFGGG +@ERR996013.1249443/1 +CATTACACATGTATTTATATTTCATTTCAATACCTTCGTGTGCCATCACTTCTCTACAGTACTCAACCACAATCATCAGAATTATG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.1295292/1 +GCCGTATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCATATT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGDGFGGGGFGG +@ERR996013.1301772/1 +GTCATAATTGTTATTGGTTTTGATCCTGTACGCACACGACCACGATATGCAAGCGAAACATCAAAGCCGTATAAAGCCATATACGACTCGTGCAGTGCGTTTGCTAACACTCGCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGDGGGGGGGGGGGG +@ERR996013.1308814/1 +TATTGATGTTTGATGAGCTCGCGAGAGATAACTTCTTGTGCTTCTAACTCTCTTTTTTTGTCAATGATCCTGTCAATGAGTTCATATTTATTT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/testData_2.fasta Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,200 @@ +>SRR3466597.2160184/2 +TACAGTCATGACTAGTGGATTCGCTTTACACCATTTTGCACGAAACATAGCTGAGGTAAAAACATACGATTTTGTCATAATTGATGAATGTCATGTGAAT +>SRR3466597.1867187/2 +GATTACGTTACAACCTTTGATGACAATATGACAATCAACCTCGAGTTGAATATGGATGAACTCCACAAGACGAGCCTTCCTGGAGT +>SRR3466597.1714296/2 +AGCTCTTGAAATTTGGGCGAAAGCCTTTAATCATGAAAAACACCGTAGATTGCGGCGGACATATAGACTT +>SRR3466597.979054/2 +CCAAACTTGGAGCATAGTGCGCAAACGCCATATGCAGGTGGAGATCATTAGCAAGAAGAGCGTCCGAGCGAGGGTCAAGAGATTTGAGGGCTCGGTGCA +>SRR3466597.1842453/2 +TGTGACAACCAACTTCCAAACTAAGAGCATGTCTAGCATGGTGTCAGACACTAGTTGCACATTCCCTTCATCTGATGGCATATTCTGGAAGCATTGGATT +>SRR3466597.1967334/2 +GCTACTCTTACCTTTCTTGCACCACCATTTACGGCTCTTGAGATGGTTCCCTTCAGGAGTTCCAAGTGGAACTTGAAAAGCGATTTC +>SRR3466597.881543/2 +GTCAAAAGCCATTAATACAAGTGTGATGAAAGCTATAATCTTTTCAAAGTATGCTATCTCCGGTTGTTTTGCCTGTTCAACGAGG +>SRR3466597.2337588/2 +CTTCATTCACTCCATAGGCTGTCATCACTGCCTGATGCCACGCGGCAAACTGCTCATGTGTGGCTCG +>SRR3466597.864405/2 +CTTCCCAACTTTGAGGATGAGAGGGAAGTCAACTTTTGGGTCAT +>SRR3466597.1545177/2 +TTTCACTAGCATATTTTAGAATGTCCTTGAGGAACGCCTCTCTATTAAGTCGACTTGGCTTATATGCTCCCATCATCGGTTTAAAATATGCTTCCTTTTC +>SRR3466597.1972168/2 +TTCATAAACATGTATGGGTTTGATCCAACTGATTTTTCATACATTAGGTTTGTGGATCCATTGACAGGTCACACTATTGATGAGTCCACAAA +>SRR3466597.431651/2 +CACACACTATTAGGGGTCCGCCAGTGATAGTTTCTGCGTGTCTTTGCTTTCCGCTTTTAAGCTTATTGTAATATATATGAATAGCTATTCACAGTGGGAC +>SRR3466597.1360962/2 +GAATGGCAATCAATAGGTCATCGCCATTGACGTAATACACAATCTCTTCCTTGTTGATTCCACACTTCTCACATGTGTATAACATTGCAATAATGACCAT +>SRR3466597.1276425/2 +CTTCCAGACGCTCAGGCAACAAATTCAAGGCGAAACTATTGAGCGTAAAGAAATTGGGAATCACTGCATTTCAATGCGGAATGGTAATTACGTG +>SRR3466597.833605/2 +CGCACTACATAGGAGAATTAGACCGAGGTGACCTCACTTTGTCGTTCGCCTAAGTAATGAGACTAATAAGACATATTAAAACATATAAGATACCATTCAA +>SRR3466597.1371609/2 +AAGTTAATTCGTCCCATGCATCCTTCAAAGCCTTTACATAGTTTTTTTCCAACATTTCATGCACCTTTTCAGAGGTCACAGCATAGCCACCTTCCCTCAA +>SRR3466597.2181878/2 +ATTAGTTGCGACTATGAAATGCTTTTTCACTGAAGTACCTTCAGTGATTATTTCAGTTCCTCCACTCTTCATTGTTCTTCCATCAATCTTCGACACTTTG +>SRR3466597.899074/2 +CTGTGAATAACAAGAGGAACAGGAGAAGGAAAGTGGCCAAAACGTACGTGGGGCGTGATTCCATTGTTGAGAAGATTGTA +>SRR3466597.1751537/2 +TTCAGGAACATTCTCAGTTCCACGAATAAATGCTATGGCCACAAAACTTCAATATCCAAG +>SRR3466597.2102827/2 +CACAGACAAAGCTATTATGATGTCCCTAGTGATTTGGCTTTTATTCCAGTGACTTTTAAGCTTCAGATGCTTAGCCACTTCGCTATCTGATTGGAGATAG +>SRR3466597.847861/2 +ATAGGATTTTCAAGCTTAGAATACTGGAAAGTTCTATTGATGATATTGTCCCACTCGCTCTCTTTCTGCAACTGTGCAGCAACCTTCGCCTCTCGGTGTG +>SRR3466597.1902260/2 +TACTGTTTGAACATGAATTTGAAGGAAAAGTCCTCAAAGTGTCAGCCACACCACCAGG +>SRR3466597.966077/2 +AAACTTGGTGAAGTCCTTTGCATCCTCTTCCTTGACATTCACTAG +>SRR3466597.29276/2 +TCATTACAAACAAGCACTTGTTTAGAAGAAATAATGGAACACTGTTGGTCCAATCACTACATGGTGTATTCAAGGTCAAGAACACCACGACTTTGCAACA +>SRR3466597.1001991/2 +TTCTAACCTTTCCAAACTCATGCTGCACTAAATCAATAGGTGCGTTTGTGGACTCATCAATAGTGTGACCTGTCAATGGATCCACAAACCTAATGTATGA +>ERR996011.39031/2 +GTACAAATTTGCATTGCCAACTATGAGGAAGGTTATGAGAAACTTCTCTAGCCAAGCTATCCTCATGTATCAGAATAGTGTTGCTGCAGGT +>ERR996011.157056/2 +ATTAATTGATGGTAACTTAATGATTGTTGGTTATGTTAATCGCGAGGTTTATCATAATCACGTCATCAAAG +>ERR996011.182572/2 +CCTTCTCCTCAATATAATCACTGGCACATTGTGATTCAAGATATTCTGCTGAATGAGGATTCTCACTGAAAAACCGAAC +>ERR996011.250248/2 +CAAGAAATTATGTCTCGCGAGCTCATCAAACATCAGTACGGAGAGTTATTTTCTTGGCGCGAACGTTTGTGTTTGAAACTAGGTATAGGTTCATCAAATCTCTATACGTACTGGGTGGAACGCGAG +>ERR996011.278646/2 +CTCACGTCATGTGCAAGAAGTTCAAATTCCGTGGTACTGCTCGGACATGAGTGATGACTTTATCGTTAAGTTAGCTGAGTGTGTC +>ERR996011.296484/2 +CCAATGTACAAATTTGCATTGCCAACTATGAGGAAGGTTATGAGAAACTTCTCTAGCCAAGCTATCCTCATGTATCAGAATAGTGTTGCTGCAGG +>ERR996011.304884/2 +TGAGTGGAATTCCGTGGCAAGAGTATCAACGTTTTTCCCTATGACAAAAGCGATTAATACCATCACGGTGCAAGCGAATGAAGGTGAAGAATTAATTGATGGTAACTTAATGATTGTTGGTTATGTTAATCGCGAGGTTTATCATAATCACGTCATCAAAGGGAAGAGAGAG +>ERR996011.319320/2 +TTTGCATTGCCAACTATGAGGAAGGTTATGAGAAACTTCTCTAGCCAAGCTATCCTCATGTATCAGAATAGTGTTGCTGCAGGTAAGGCATTTGTGATAAAAGCTGCTAGAAATGCTGG +>ERR996011.335413/2 +CAAGAAATTATGTCTCGCGAGCTCATCAAACATCAGTACGGAGAGTTATTTTCTTGGCGCGAACGTTTGTGTTTGAAACTAGGTATAGGTTCATCAAATCTCTATACGTACTGGGTGGAACGCGAGGAAAAACAATCAGAGAAATCGAGTGCAATCTCTTGCATCATTTCCAAACCGGGAATAGAG +>ERR996011.340106/2 +CTGGGTGGAACGCGAGGAAAAACAATCAGAGAAATCGAGTGCAATCTCTTGCATCATTTCCAAACCGGGAATAGAGATGTTGATAAATTG +>ERR996011.354526/2 +GGTCAGTTAGGAGTGTTACACAGAGGCAAGCTTTGACAGCATCCATGTTTGAAGCGAATTATATATTCACAGCTCACTTGGTAGATAAACAAGGTTTCATGCCGA +>ERR996011.433744/2 +CTCACGTCATGTGCAAGAAGTTCAAATTCCGTGGTACTGCTCGGACATGAGTGATGACTTTATCGTTAAGTTAGCTGAG +>ERR996011.436007/2 +GAGGAATTGATGATTATGAATCTCTTGTTCGGTTTTTCAGTGAGAATCCTCATTCAGCAGAATATCTTGAATCACAATGTGCCAGTGATTATATTGAG +>ERR996011.526546/2 +CAAGAAATTATGTCTCGCGAGCTCATCAAACATCAGTACGGAGAGTTATTTTCTTGGCGCGAACGTTTGTGTTTGAAACTAGGTATAGGTTCATCAAATCTCTATACGTACTGGGTGGAACGCGAGGAAAAACAATCAGAGAAATCGAGTGCAATCTCTTGCATCATTTCCAAACCGG +>ERR996011.586857/2 +CATCAAATCTCTATACGTACTGGGTGGAACGCGAGGAAAAACAA +>ERR996011.605463/2 +TGTACAAATTTGCATTGCCAACTATGAGGAAGGTTATGAGAAACTTCTCTAGCCAAGCTATCCTCATGTATCAGAATAGTGTTGCTGCAGGTAAGGCATTTGTGATAAAAGCTGCTAGAAATGCTGGATACACAAGTATTGAAAAT +>ERR996011.625574/2 +CTGGGTGGAACGCGAGGAAAAACAATCAGAGAAATCGAGTGCAATCTCTTGCATCATTTCCAAACCGGGAATAGAGATGTTGATAAATTG +>ERR996011.805567/2 +GTTACATTTGTGACAGGAAATTTGGGAAAATTAGCAGAAGTGAAGCC +>ERR996011.840514/2 +GAAACTTCTCTAGCCAAGCTATCCTCATGTATCAGAATAGTGTTGCTGCAGGTAAGGCATTTGTGATAAAAGCTGCTAGAAATGCTGGATACACAAG +>ERR996011.904946/2 +ATCAAATCTCTATACGTACTGGGTGGAACGCGAGGAAAAACAATCAGAGAAATCGAGTGCAATCTCTTGCATCATTTCCAAACCGGGAATAGAGATGTTGATAAATTGGGTCTCAGAAGTGTGTAAGAG +>ERR996011.940698/2 +CCTATGACAAAAGCGATTAATACCATCACGGTGCAAGCGAATGAAGGTGAAGAATTAATTGATGGTAACTTAATGATTGTTGGTTATGTTAATCGCGAGGTTTATCATAATCACGTCATCAAAGGGAAGAGAGAG +>ERR996011.972900/2 +AAATTATGTCTCGCGAGCTCATCAAACATCAGTACGGAGAGTTATTTTCTTGGCGCGAACGTTTGTGTTTGAAACTAGGTATAGGTTCATCAAATCTCTATACGTACTGGGTGGAACGCGAGGAAAAACAATCAGAGAAATCGAGTGCAATCTCTTGCATCATTTCCAAACCGGG +>ERR996011.1057660/2 +TGATGATTATGAATCTCTTGTTCGGTTTTTCAGTGAGAATCCTCATTCAGCAGAATATCTTGAATCACAATGTGCCAGTGATTATATTGAGG +>ERR996011.1202493/2 +CGATAACTCACGTCATGTGCAAGAAGTTCAAATTCCGTGGTACTGCTCGGACATGAGTGATGACTTTATCGTTAAGTTAGCTGAG +>ERR996011.1221866/2 +GCCCCACAAGTTGAGCGTGTAAATGAGTTACTTCAGAAACTGAAAGATGAAGGATTGCAAACAAAGAAGAG +>ERR996011.1225250/2 +TGAATCTCTTGTTCGGTTTTTCAGTGAGAATCCTCATTCAGCAGAATATCTTGAATCACAATGTGC +>ERR996011.1248576/2 +TGGAAATAATAGTGGACAACCTTCTACAGTTGTCGATAACACTATTATACTAATGATTGTTGTGGAATATTGCAAGGCTGTCATGGAAAGTGAAG +>ERR996011.1254369/2 +CCAATGTACAAATTTGCATTGCCAACTATGAGGAAGGTTATGAGAAACTTCTCTAGCCAAGCTATCCTCATGTATCAGAATAGTGTTGCTGCAGGTAAGGCAT +>ERR996011.1270424/2 +CTCACGTCATGTGCAAGAAGTTCAAATTCCGTGGTACTGCTCGGACATGAGTGATGACTTTATCGTTAAGTTAGCTGAGT +>ERR996011.1371856/2 +GTTGGTTATGTTAATCGCGAGGTTTATCATAATCACGTCATCAAAGGGAAGAGAGAGA +>ERR996013.13602/2 +ATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCT +>ERR996013.32029/2 +CTACGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTT +>ERR996013.75116/2 +GCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGTAAAACTATCCTCACTCTGGAAGGAAAGAGAAAGAGTGAAAC +>ERR996013.134143/2 +GTCAAATAAATATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCA +>ERR996013.138713/2 +CAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGAT +>ERR996013.173891/2 +CAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCAAAATTATC +>ERR996013.193314/2 +GCGAAGAAGGCTAGATTTTACAAATATGTTGATCATATGATACTTAAAGGTAGCCCATTGGTTGACATACTTGTAAAGATGGAGTACGTTG +>ERR996013.194974/2 +GCCACGTCCAGTGTTTGAGTTGATGAAGAACTTGTTGTTGCATACAGATGCTGTCGGTATATGTAGCACATACTTAGCCACGAACATGAGTGAGTGGAG +>ERR996013.198787/2 +TGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGC +>ERR996013.236824/2 +ATTTGTGTTCCTACGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATATCGTGGTCG +>ERR996013.351799/2 +GCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAAT +>ERR996013.372913/2 +CTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGC +>ERR996013.376059/2 +GATCATTGATAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATTTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTCAATCAACATTGGTTTCGATTCTGCAAAACTATCCTCACTCTGGA +>ERR996013.453686/2 +TTCTGTGCTAATTTGTGTTCCTACGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGC +>ERR996013.484483/2 +GTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCAAAATTATCC +>ERR996013.489616/2 +GCTAATTTGTGTTCCTACGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATATCGTGG +>ERR996013.497754/2 +CGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATATCGTGGTCGTGTGCGTACAGGA +>ERR996013.515914/2 +GTGGAGAGCTGTTGAGCTAAATGCGCAGGGTGAGGATATTGATGATTCAGAATACCCTATGGAACCAATGTACAAATTTGCTCTCCCG +>ERR996013.518430/2 +GCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCA +>ERR996013.656197/2 +CTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAG +>ERR996013.656523/2 +GTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATA +>ERR996013.692538/2 +AAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATC +>ERR996013.696477/2 +TGTGTTCCTACGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATATCGTGGTCGTGTGCGTACAGG +>ERR996013.738638/2 +GTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCAAAATTATCC +>ERR996013.747299/2 +GACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGC +>ERR996013.752745/2 +TCCTACGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATATCGTGGTCGTGTGCGTACAGGATCAAAACCAATAACA +>ERR996013.756913/2 +AAATCGTGGAGAGCTGTTGAGCTAAATGCGCAGGGTGAGGATATTGATGATTCAGAATACCCTATGGAACCAATGTACAAATTTGCTCTCCCAACAATGAGGAAAATAATGAGAAATTTTTCCAGCCAAG +>ERR996013.793496/2 +AAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTG +>ERR996013.804840/2 +TGATGATTCAGAATACCCTATGGAACCAATGTACAAATTTGCTCTCCCAACAATGAGGAAAATAATGAGAAATTTTTCCAGCCAAG +>ERR996013.860827/2 +CACTCTTTGGCTCTATGCGAAGAAGGCTAGATTTTACAAATATGTTGATCATATGATACTTAAAGGTAGCCCATTGGTTGACATACTTG +>ERR996013.909965/2 +GTCAAATAAATATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAAT +>ERR996013.937909/2 +ATAAATATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGC +>ERR996013.947899/2 +CTTTGGCTCTATGCGAAGAAGGCTAGATTTTACAAATATGTTGATCATATGATACTTAAAGGTAGCCCATTGGTTGACATACTTGTAAAGATGGAG +>ERR996013.967303/2 +TAAATATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAG +>ERR996013.994308/2 +TGGGAATTCAGGACCAGAGTGGGATCCAATGGAGATTTTGAGTGATCTCAACAAGAAAGCAGCGATGGGAGCATTGTATCAAGGTAG +>ERR996013.1066941/2 +CTCTATGCGAAGAAGGCTAGATTTTACAAATATGTTGATCATATGATACTTAAAGGTAGCCCATTGGTTGACATACTTGTAAAGATG +>ERR996013.1134829/2 +AAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCA +>ERR996013.1154101/2 +CTCTTTGGCTCTATGCGAAGAAGGCTAGATTTTACAAATATGTTGATCATATGATACTTAAAGGTAGCCCATTGGTTGACATACTTG +>ERR996013.1172801/2 +CAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCAA +>ERR996013.1177982/2 +AAAGAGAGTTAGAAGCACAAGAAGTTATTTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTCAATCAACATTGGTTTCGATTCTGCAAAACTATCCTCACTCTGGAAGGAAAGGG +>ERR996013.1222223/2 +AACTCATTGACAGGATCATTGATAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATTTCTCGCGAGCTCATCAAACATCAATACGGCG +>ERR996013.1249443/2 +CATAATTCTGATGATTGTGGTTGAGTACTGTAGAGAAGTGATGGCACACGAAGGTATTGAAATGAAATATAAATACATGTGTAATG +>ERR996013.1295292/2 +AATATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGC +>ERR996013.1301772/2 +CGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATATCGTGGTCGTGTGCGTACAGGATCAAAACCAATAACAATTATGAC +>ERR996013.1308814/2 +AAATAAATATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATA
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/testData_2.fastq Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,400 @@ +@SRR3466597.2160184/2 +TACAGTCATGACTAGTGGATTCGCTTTACACCATTTTGCACGAAACATAGCTGAGGTAAAAACATACGATTTTGTCATAATTGATGAATGTCATGTGAAT ++ +@@@FFDEFHHHHHGJHGID@HHBGAFGHGIGJCBFHIIIGIAHIIIJJJJFHIEIGIIJJIJIIGIIE??EFFFFECCEE@EEEEADCCCCEDCCACEEE +@SRR3466597.1867187/2 +GATTACGTTACAACCTTTGATGACAATATGACAATCAACCTCGAGTTGAATATGGATGAACTCCACAAGACGAGCCTTCCTGGAGT ++ +CCCFFFFFFHHHHIIJIIGIJEHHIIIIIIJJIIIIIGGIIJJJDFHHJJFIIIIHGGIIIJJGHEGCCCHEHF<BECCCDDABD; +@SRR3466597.1714296/2 +AGCTCTTGAAATTTGGGCGAAAGCCTTTAATCATGAAAAACACCGTAGATTGCGGCGGACATATAGACTT ++ +CCCFFFFFHHHHHJJIJJJJJJJGIJJJIEIIJIJIJIJJJJJJJFHIJJIJJJIHDD8<BCC@CAC@CA +@SRR3466597.979054/2 +CCAAACTTGGAGCATAGTGCGCAAACGCCATATGCAGGTGGAGATCATTAGCAAGAAGAGCGTCCGAGCGAGGGTCAAGAGATTTGAGGGCTCGGTGCA ++ +@??DFFFFHHFHGJJIIECGEIGG@GEHGHEGGIGIIJ8BFDHDHICHGHFHIEHHGIJEEFB?<AAB@@BBDD<C?@CDDDCDCCC<ABDBBB@8?B: +@SRR3466597.1842453/2 +TGTGACAACCAACTTCCAAACTAAGAGCATGTCTAGCATGGTGTCAGACACTAGTTGCACATTCCCTTCATCTGATGGCATATTCTGGAAGCATTGGATT ++ +CC@FFFFFHHHHHIJJJJJJJJJJJJJIJIIGIJIIIJJJJGHIIJIIJJHIIJJJJJGJIIJJJJJJJJIJJJFGHHHFHFFEFFFFEDEDEDDDDCDD +@SRR3466597.1967334/2 +GCTACTCTTACCTTTCTTGCACCACCATTTACGGCTCTTGAGATGGTTCCCTTCAGGAGTTCCAAGTGGAACTTGAAAAGCGATTTC ++ +@@@FDFDDBDFHDGGHEHI<FHIIJIIJEFHIGGIFIGG9<F?D<FDGCEFD?==BB>C8@@DGGE==DGEHEHHDDDFDC?ACB@D +@SRR3466597.881543/2 +GTCAAAAGCCATTAATACAAGTGTGATGAAAGCTATAATCTTTTCAAAGTATGCTATCTCCGGTTGTTTTGCCTGTTCAACGAGG ++ +BBBFFFFFHHHHHIJJJJJGIFHHIJJJJJJIIIJJJJIJJJJJJIIIFFBFIIJIJJJJJIJHGIIIJGIIJHHHHHG@DE?>< +@SRR3466597.2337588/2 +CTTCATTCACTCCATAGGCTGTCATCACTGCCTGATGCCACGCGGCAAACTGCTCATGTGTGGCTCG ++ +BCCFFFFFHHHHHJJJGGIIJJJIJJEIIIIGCHFHHIIJIGGGGIBHIJJIIGHHHHHCEEDBDE8 +@SRR3466597.864405/2 +CTTCCCAACTTTGAGGATGAGAGGGAAGTCAACTTTTGGGTCAT ++ +@@BDDDDFADDHF<@F?G<<GB@7DE@FBBFGHCHEEH@FGEHD +@SRR3466597.1545177/2 +TTTCACTAGCATATTTTAGAATGTCCTTGAGGAACGCCTCTCTATTAAGTCGACTTGGCTTATATGCTCCCATCATCGGTTTAAAATATGCTTCCTTTTC ++ +BCCFF>D?FHFHHJJJJJJJIIJBHJJJIIJJIIJJFIJIJJIIJJIIJIIGIIIJJJJJJJJJJJJIIJHHHHHFFFFDDDCDDCCCDEDEEDDDDDDC +@SRR3466597.1972168/2 +TTCATAAACATGTATGGGTTTGATCCAACTGATTTTTCATACATTAGGTTTGTGGATCCATTGACAGGTCACACTATTGATGAGTCCACAAA ++ +B@CFFFF;FHHFFHHJIJFGEHEHEHCEHGI@HHJIIICGGIJJDH>FDHB@GIHHIGIGIJIIGGHIAC@E;D>>?EA?EH>CDCCDAAAB +@SRR3466597.431651/2 +CACACACTATTAGGGGTCCGCCAGTGATAGTTTCTGCGTGTCTTTGCTTTCCGCTTTTAAGCTTATTGTAATATATATGAATAGCTATTCACAGTGGGAC ++ +C@CFFFFFHHHHHJIIAGHIJJJJFGGIIFGGIJGHIJGBGGIGIGHIJJHIIIJJBHA?EHHHFFFDFFFEEDDDEDCDDDDCCDEDDDFCDDCDD@AB +@SRR3466597.1360962/2 +GAATGGCAATCAATAGGTCATCGCCATTGACGTAATACACAATCTCTTCCTTGTTGATTCCACACTTCTCACATGTGTATAACATTGCAATAATGACCAT ++ +CCCFFFFFHHHCDCGGHFHGIJJJJHIJJJJJHHJJJJJJJJIJJJJJJJHHJJJJGJJJIJJJJJJJJJJJGHHHHHHFFFFFFFEEEECCCECDDDCD +@SRR3466597.1276425/2 +CTTCCAGACGCTCAGGCAACAAATTCAAGGCGAAACTATTGAGCGTAAAGAAATTGGGAATCACTGCATTTCAATGCGGAATGGTAATTACGTG ++ +@CCFDBADDFHHHGHDAGHEGIIIIIIJJGEGIJJJIHEIHCBFGAGIGIGGEEEEFDDCBDCC@CCDDEAD@C;>C??@??CD>ACDCD@?8< +@SRR3466597.833605/2 +CGCACTACATAGGAGAATTAGACCGAGGTGACCTCACTTTGTCGTTCGCCTAAGTAATGAGACTAATAAGACATATTAAAACATATAAGATACCATTCAA ++ +@@CFFFFFHHHHHGIJIGIGEHHFFHIJFDHGGHEFHHIIGHIIFGIIIIIJHHAHHFFD@DFFEEEEDEEDDDDDEEDDCCDDDCDECCCCC:ACCDEC +@SRR3466597.1371609/2 +AAGTTAATTCGTCCCATGCATCCTTCAAAGCCTTTACATAGTTTTTTTCCAACATTTCATGCACCTTTTCAGAGGTCACAGCATAGCCACCTTCCCTCAA ++ +B@@DDAFFFFFDHIIJJJIJIIJJFGCCHGHIIIIJJGGIHGGIIJ>GHI=CB@FHIIGIGGEADEEHEHHFDFF@CE@AAB?@CCDCD9<?ACCDDDDC +@SRR3466597.2181878/2 +ATTAGTTGCGACTATGAAATGCTTTTTCACTGAAGTACCTTCAGTGATTATTTCAGTTCCTCCACTCTTCATTGTTCTTCCATCAATCTTCGACACTTTG ++ +<@@?DABBDHFDHBGIEGHH@>FEG<E?@D><DH@??H@FBGGI@<DEIIFHIEIIAFGGHGBGGCGIGHICCHHDEEHH;CABDE;BD66;;=8>;ACC +@SRR3466597.899074/2 +CTGTGAATAACAAGAGGAACAGGAGAAGGAAAGTGGCCAAAACGTACGTGGGGCGTGATTCCATTGTTGAGAAGATTGTA ++ +@@@DDAFFHDHHHJIIJJGIJJDHJJJEIJIIDCGHIJJIJGIJHIBEFHGGIIC<@@CCDDCCDDDCDDDBD?C>AC:@ +@SRR3466597.1751537/2 +TTCAGGAACATTCTCAGTTCCACGAATAAATGCTATGGCCACAAAACTTCAATATCCAAG ++ +@C?D?DFFHGHGFGEHIJJJJJICGEEFGIEE@FHGGGIIBGD;DEEBCB?E9D<<BBFE +@SRR3466597.2102827/2 +CACAGACAAAGCTATTATGATGTCCCTAGTGATTTGGCTTTTATTCCAGTGACTTTTAAGCTTCAGATGCTTAGCCACTTCGCTATCTGATTGGAGATAG ++ +@C@FFFFFBHHHHJFIJJJJJJIIJJIEIHGIJJGGIFHHIJCIIJIJJCFHGIJIJIJIIJJIIGJJJJJJIJIGIIGIEFHH?DFFEEEDC@AC?CC@ +@SRR3466597.847861/2 +ATAGGATTTTCAAGCTTAGAATACTGGAAAGTTCTATTGATGATATTGTCCCACTCGCTCTCTTTCTGCAACTGTGCAGCAACCTTCGCCTCTCGGTGTG ++ +CCCFFFFFHHHHHJJJJJJJJJJJJIJJJJJHIIJIJJJIJJFIJIJJJJIIJIJJJJJJJJIJJJJJJJIJJIIJIJJHHGHFFFFFCCDDDDD???BB +@SRR3466597.1902260/2 +TACTGTTTGAACATGAATTTGAAGGAAAAGTCCTCAAAGTGTCAGCCACACCACCAGG ++ +BCCFFDDEDFHHGFGCHGIJIHGJJIIJIGGIEHJJIJI<F@GGHIIIECFIFGHHID +@SRR3466597.966077/2 +AAACTTGGTGAAGTCCTTTGCATCCTCTTCCTTGACATTCACTAG ++ +@@<DDDFD:CFFDGHGGIE>HHGGCHGEHIJCGEGHFHIEEGEDA +@SRR3466597.29276/2 +TCATTACAAACAAGCACTTGTTTAGAAGAAATAATGGAACACTGTTGGTCCAATCACTACATGGTGTATTCAAGGTCAAGAACACCACGACTTTGCAACA ++ +@@@FFFFFHHHFFIIIHJJFHIJJIIIIIJJJJIJJIJJJIJHHIJGIHHIHIJIGGGHGIGGI=FFHJJJGGCCHHHHHCBEDFDDDBBDBBDDDDCCB +@SRR3466597.1001991/2 +TTCTAACCTTTCCAAACTCATGCTGCACTAAATCAATAGGTGCGTTTGTGGACTCATCAATAGTGTGACCTGTCAATGGATCCACAAACCTAATGTATGA ++ +CCCFFFFFHHHFFIJJJJIJJIJJIJJJJIIHHIIGIIJIFHGIIIGIJICIGIIIIJJGIGIAG@GGHGIJGHHHHHECFDF@C:AEDBCDDDD>BCDC +@ERR996011.39031/2 +GTACAAATTTGCATTGCCAACTATGAGGAAGGTTATGAGAAACTTCTCTAGCCAAGCTATCCTCATGTATCAGAATAGTGTTGCTGCAGGT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGFGGGGGGGGGFFFBFGGGGGGG +@ERR996011.157056/2 +ATTAATTGATGGTAACTTAATGATTGTTGGTTATGTTAATCGCGAGGTTTATCATAATCACGTCATCAAAG ++ +CCCCCGGGGDGGFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGFGFFFFGGGGGGGGGGGGGGG +@ERR996011.182572/2 +CCTTCTCCTCAATATAATCACTGGCACATTGTGATTCAAGATATTCTGCTGAATGAGGATTCTCACTGAAAAACCGAAC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.250248/2 +CAAGAAATTATGTCTCGCGAGCTCATCAAACATCAGTACGGAGAGTTATTTTCTTGGCGCGAACGTTTGTGTTTGAAACTAGGTATAGGTTCATCAAATCTCTATACGTACTGGGTGGAACGCGAG ++ +CCCCCGGGEGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGEEGGGGFGGFGFGGDDGDEGFFGGGGGGGGGGGGGGGGFEFGGGGGGGGFGGGGFGGGGGGGGGGFCFGGGGGGG>FFGFEGGGG +@ERR996011.278646/2 +CTCACGTCATGTGCAAGAAGTTCAAATTCCGTGGTACTGCTCGGACATGAGTGATGACTTTATCGTTAAGTTAGCTGAGTGTGTC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.296484/2 +CCAATGTACAAATTTGCATTGCCAACTATGAGGAAGGTTATGAGAAACTTCTCTAGCCAAGCTATCCTCATGTATCAGAATAGTGTTGCTGCAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9FGGGGGGGGGGGGGGGGGGG +@ERR996011.304884/2 +TGAGTGGAATTCCGTGGCAAGAGTATCAACGTTTTTCCCTATGACAAAAGCGATTAATACCATCACGGTGCAAGCGAATGAAGGTGAAGAATTAATTGATGGTAACTTAATGATTGTTGGTTATGTTAATCGCGAGGTTTATCATAATCACGTCATCAAAGGGAAGAGAGAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.319320/2 +TTTGCATTGCCAACTATGAGGAAGGTTATGAGAAACTTCTCTAGCCAAGCTATCCTCATGTATCAGAATAGTGTTGCTGCAGGTAAGGCATTTGTGATAAAAGCTGCTAGAAATGCTGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.335413/2 +CAAGAAATTATGTCTCGCGAGCTCATCAAACATCAGTACGGAGAGTTATTTTCTTGGCGCGAACGTTTGTGTTTGAAACTAGGTATAGGTTCATCAAATCTCTATACGTACTGGGTGGAACGCGAGGAAAAACAATCAGAGAAATCGAGTGCAATCTCTTGCATCATTTCCAAACCGGGAATAGAG ++ +C@CCCGGGGGGGGGGGGDGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGFFFFCGGGGGFGGGGFGGFGGGGGGGDFFGGGEFFFGFCEFEGGCFGGCFGGGGFCFFGGGGGGGGGGGGGGGGGEEGFG9=DFDFGGFGFGGGGFGGGGGEEGGDDCGF +@ERR996011.340106/2 +CTGGGTGGAACGCGAGGAAAAACAATCAGAGAAATCGAGTGCAATCTCTTGCATCATTTCCAAACCGGGAATAGAGATGTTGATAAATTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.354526/2 +GGTCAGTTAGGAGTGTTACACAGAGGCAAGCTTTGACAGCATCCATGTTTGAAGCGAATTATATATTCACAGCTCACTTGGTAGATAAACAAGGTTTCATGCCGA ++ +CCCCCEGGFGGFGGGGGGGGGGGGGGEGFGGGGEEGGGGGGFFGFCFEFFGGGGGGDGGGGGGGGGDFGGGGGGGGDGFCFEEGGFGGGFGGGGGCGGGGGGFE@ +@ERR996011.433744/2 +CTCACGTCATGTGCAAGAAGTTCAAATTCCGTGGTACTGCTCGGACATGAGTGATGACTTTATCGTTAAGTTAGCTGAG ++ +CCCCCGG?FGGGFGGGGGGGGGGGGGGGGGGGGEGGGGGGFGGGDGGGGGGGGGGFGGGGGGGGGGGGGGGGFGGGGGG +@ERR996011.436007/2 +GAGGAATTGATGATTATGAATCTCTTGTTCGGTTTTTCAGTGAGAATCCTCATTCAGCAGAATATCTTGAATCACAATGTGCCAGTGATTATATTGAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.526546/2 +CAAGAAATTATGTCTCGCGAGCTCATCAAACATCAGTACGGAGAGTTATTTTCTTGGCGCGAACGTTTGTGTTTGAAACTAGGTATAGGTTCATCAAATCTCTATACGTACTGGGTGGAACGCGAGGAAAAACAATCAGAGAAATCGAGTGCAATCTCTTGCATCATTTCCAAACCGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGG +@ERR996011.586857/2 +CATCAAATCTCTATACGTACTGGGTGGAACGCGAGGAAAAACAA ++ +CCB@CFGGFGGGGFFEGGGC<EA@FBCGGGGGGCGEEFFFFFG< +@ERR996011.605463/2 +TGTACAAATTTGCATTGCCAACTATGAGGAAGGTTATGAGAAACTTCTCTAGCCAAGCTATCCTCATGTATCAGAATAGTGTTGCTGCAGGTAAGGCATTTGTGATAAAAGCTGCTAGAAATGCTGGATACACAAGTATTGAAAAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGFGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.625574/2 +CTGGGTGGAACGCGAGGAAAAACAATCAGAGAAATCGAGTGCAATCTCTTGCATCATTTCCAAACCGGGAATAGAGATGTTGATAAATTG ++ +CCCCCGEGGGGGGGFGEEGGGGGGGGGGGGFEFFGGEFDEFFGGGGGGGGGGGGGGGGG9FGEGGGCFG7:CFGGC@@CEGG9FGGCFFD +@ERR996011.805567/2 +GTTACATTTGTGACAGGAAATTTGGGAAAATTAGCAGAAGTGAAGCC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGFGGGFGGGGGGGGGGGGGG +@ERR996011.840514/2 +GAAACTTCTCTAGCCAAGCTATCCTCATGTATCAGAATAGTGTTGCTGCAGGTAAGGCATTTGTGATAAAAGCTGCTAGAAATGCTGGATACACAAG ++ +CCCCCGGGGGGGGGGGGGGGEFGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.904946/2 +ATCAAATCTCTATACGTACTGGGTGGAACGCGAGGAAAAACAATCAGAGAAATCGAGTGCAATCTCTTGCATCATTTCCAAACCGGGAATAGAGATGTTGATAAATTGGGTCTCAGAAGTGTGTAAGAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.940698/2 +CCTATGACAAAAGCGATTAATACCATCACGGTGCAAGCGAATGAAGGTGAAGAATTAATTGATGGTAACTTAATGATTGTTGGTTATGTTAATCGCGAGGTTTATCATAATCACGTCATCAAAGGGAAGAGAGAG ++ +CCCCCGGFGGGGGGGGGGGGGGG@FGGGGGDGEFGFGGGG>GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGG>FGGCFFDGG +@ERR996011.972900/2 +AAATTATGTCTCGCGAGCTCATCAAACATCAGTACGGAGAGTTATTTTCTTGGCGCGAACGTTTGTGTTTGAAACTAGGTATAGGTTCATCAAATCTCTATACGTACTGGGTGGAACGCGAGGAAAAACAATCAGAGAAATCGAGTGCAATCTCTTGCATCATTTCCAAACCGGG ++ +CCCCCGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGFGGGGGGGGGGGGGFGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGG@ +@ERR996011.1057660/2 +TGATGATTATGAATCTCTTGTTCGGTTTTTCAGTGAGAATCCTCATTCAGCAGAATATCTTGAATCACAATGTGCCAGTGATTATATTGAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.1202493/2 +CGATAACTCACGTCATGTGCAAGAAGTTCAAATTCCGTGGTACTGCTCGGACATGAGTGATGACTTTATCGTTAAGTTAGCTGAG ++ +CCCCCGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGDGGGG +@ERR996011.1221866/2 +GCCCCACAAGTTGAGCGTGTAAATGAGTTACTTCAGAAACTGAAAGATGAAGGATTGCAAACAAAGAAGAG ++ +CCCCCGGGGGFFFGGGGGGGGGGGGFGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGG +@ERR996011.1225250/2 +TGAATCTCTTGTTCGGTTTTTCAGTGAGAATCCTCATTCAGCAGAATATCTTGAATCACAATGTGC ++ +CCCCCGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGFFGGGGGGGGGGGGGGGGGFFGGGGG +@ERR996011.1248576/2 +TGGAAATAATAGTGGACAACCTTCTACAGTTGTCGATAACACTATTATACTAATGATTGTTGTGGAATATTGCAAGGCTGTCATGGAAAGTGAAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.1254369/2 +CCAATGTACAAATTTGCATTGCCAACTATGAGGAAGGTTATGAGAAACTTCTCTAGCCAAGCTATCCTCATGTATCAGAATAGTGTTGCTGCAGGTAAGGCAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996011.1270424/2 +CTCACGTCATGTGCAAGAAGTTCAAATTCCGTGGTACTGCTCGGACATGAGTGATGACTTTATCGTTAAGTTAGCTGAGT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGG +@ERR996011.1371856/2 +GTTGGTTATGTTAATCGCGAGGTTTATCATAATCACGTCATCAAAGGGAAGAGAGAGA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.13602/2 +ATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.32029/2 +CTACGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTT ++ +CCCCCEGGGGFGGGGGGFGGGGGGGGCCGGGCFGGEGGGFGCGGDGFGGGG>EEGGGGGFACE +@ERR996013.75116/2 +GCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGTAAAACTATCCTCACTCTGGAAGGAAAGAGAAAGAGTGAAAC ++ +CCCCCGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.134143/2 +GTCAAATAAATATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.138713/2 +CAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGAT ++ +CCCCCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.173891/2 +CAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCAAAATTATC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.193314/2 +GCGAAGAAGGCTAGATTTTACAAATATGTTGATCATATGATACTTAAAGGTAGCCCATTGGTTGACATACTTGTAAAGATGGAGTACGTTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDCFGGGGGGGGGGGGGGGGGGGGFGGGGGFGGGGGGGGGGGGGGGGGGGGGFF +@ERR996013.194974/2 +GCCACGTCCAGTGTTTGAGTTGATGAAGAACTTGTTGTTGCATACAGATGCTGTCGGTATATGTAGCACATACTTAGCCACGAACATGAGTGAGTGGAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.198787/2 +TGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.236824/2 +ATTTGTGTTCCTACGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATATCGTGGTCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.351799/2 +GCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.372913/2 +CTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.376059/2 +GATCATTGATAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATTTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTCAATCAACATTGGTTTCGATTCTGCAAAACTATCCTCACTCTGGA ++ +CCCCCGGGFGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGEGGGGGGGGGGGGGGDGGEGGGGGGGGGGGGGGGGGGGFFFGGGGDGGGGGGGFGGGGGGGGGGGGGGGGGG +@ERR996013.453686/2 +TTCTGTGCTAATTTGTGTTCCTACGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGCFGGGGG +@ERR996013.484483/2 +GTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCAAAATTATCC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.489616/2 +GCTAATTTGTGTTCCTACGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATATCGTGG ++ +CCCCCGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGFCG +@ERR996013.497754/2 +CGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATATCGTGGTCGTGTGCGTACAGGA ++ +CCCCCGFGGGGGGGGGGGGGGGGGGGGGEGGGGFGGFGGGGGGFGGGGGGGGGFAFCFGGGDCEGGGCEG9FFGCFGEFFDCCFEGCGGGGF +@ERR996013.515914/2 +GTGGAGAGCTGTTGAGCTAAATGCGCAGGGTGAGGATATTGATGATTCAGAATACCCTATGGAACCAATGTACAAATTTGCTCTCCCG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGFGGGGGGGGGFGGGGGGGGFGGGGGGFGGGGFF +@ERR996013.518430/2 +GCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGFGGGGGGGGGGGG +@ERR996013.656197/2 +CTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGFEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGFGGGGGGGGGGG +@ERR996013.656523/2 +GTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATA ++ +CCCCCGGGGGC<FFEEEGGFGGEEFGGGGGGGGGCGGGGGGGGCFDFFDG9E<EFCBFEFEFFEE +@ERR996013.692538/2 +AAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.696477/2 +TGTGTTCCTACGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATATCGTGGTCGTGTGCGTACAGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGFGG<@FGFFGGGGGGGG>:FCFGGGGGGG +@ERR996013.738638/2 +GTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCAAAATTATCC ++ +CCCCCGFGGGGGGFGDEGGGGGGGGGFFGGGGGGGGGEGFFFFFGGCGGGCFFGGGGGGGGGEFGG8FGGGGEF9EFGGGGGGGFGGFCEDFGFGGGGG +@ERR996013.747299/2 +GACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFDFFGGGG?FGGGGG +@ERR996013.752745/2 +TCCTACGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATATCGTGGTCGTGTGCGTACAGGATCAAAACCAATAACA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.756913/2 +AAATCGTGGAGAGCTGTTGAGCTAAATGCGCAGGGTGAGGATATTGATGATTCAGAATACCCTATGGAACCAATGTACAAATTTGCTCTCCCAACAATGAGGAAAATAATGAGAAATTTTTCCAGCCAAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.793496/2 +AAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.804840/2 +TGATGATTCAGAATACCCTATGGAACCAATGTACAAATTTGCTCTCCCAACAATGAGGAAAATAATGAGAAATTTTTCCAGCCAAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEFFGGGGGG +@ERR996013.860827/2 +CACTCTTTGGCTCTATGCGAAGAAGGCTAGATTTTACAAATATGTTGATCATATGATACTTAAAGGTAGCCCATTGGTTGACATACTTG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGG +@ERR996013.909965/2 +GTCAAATAAATATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAAT ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.937909/2 +ATAAATATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGC ++ +CCCCCGGGGGGGEFGGGFGGGGGGGGGGGGGGGGGGGDGGFGGGGDGCGGGGGGGGGGGGGGGGGEGFGGGGGGGEFGC<FFFFGG@FEFGGDGG +@ERR996013.947899/2 +CTTTGGCTCTATGCGAAGAAGGCTAGATTTTACAAATATGTTGATCATATGATACTTAAAGGTAGCCCATTGGTTGACATACTTGTAAAGATGGAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.967303/2 +TAAATATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGFGGGGGGGGGGFGGGGGGGGGGGGG +@ERR996013.994308/2 +TGGGAATTCAGGACCAGAGTGGGATCCAATGGAGATTTTGAGTGATCTCAACAAGAAAGCAGCGATGGGAGCATTGTATCAAGGTAG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.1066941/2 +CTCTATGCGAAGAAGGCTAGATTTTACAAATATGTTGATCATATGATACTTAAAGGTAGCCCATTGGTTGACATACTTGTAAAGATG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.1134829/2 +AAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGFGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGG +@ERR996013.1154101/2 +CTCTTTGGCTCTATGCGAAGAAGGCTAGATTTTACAAATATGTTGATCATATGATACTTAAAGGTAGCCCATTGGTTGACATACTTG ++ +<CCCCGGFGFGGGGGGGEGEEGGGGGGGGGGGGGEFGGGGGGGGGGGFFGGGFGGGGGGGGGGFGAEGGGGGGGGGGGGGGGEFGGC +@ERR996013.1172801/2 +CAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTTAATCAACATTGGTTTCGATTCTGCAA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGF +@ERR996013.1177982/2 +AAAGAGAGTTAGAAGCACAAGAAGTTATTTCTCGCGAGCTCATCAAACATCAATACGGCGATTTGTTTTCGCTGCGAGAGCGACTTTCAATCAACATTGGTTTCGATTCTGCAAAACTATCCTCACTCTGGAAGGAAAGGG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFCGCGFGGGG +@ERR996013.1222223/2 +AACTCATTGACAGGATCATTGATAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATTTCTCGCGAGCTCATCAAACATCAATACGGCG ++ +CCCCCGGGGGGGGGGGGGGGGFGGGGGGEFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGFGGCGGGGGGGGGGGGGGGGC +@ERR996013.1249443/2 +CATAATTCTGATGATTGTGGTTGAGTACTGTAGAGAAGTGATGGCACACGAAGGTATTGAAATGAAATATAAATACATGTGTAATG ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGG +@ERR996013.1295292/2 +AATATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATACGGC ++ +CCCCCGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG +@ERR996013.1301772/2 +CGCGAGTGTTAGCAAACGCACTGCACGAGTCGTATATGGCTTTATACGGCTTTGATGTTTCGCTTGCATATCGTGGTCGTGTGCGTACAGGATCAAAACCAATAACAATTATGAC ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGFGGG +@ERR996013.1308814/2 +AAATAAATATGAACTCATTGACAGGATCATTGACAAAAAAAGAGAGTTAGAAGCACAAGAAGTTATCTCTCGCGAGCTCATCAAACATCAATA ++ +CCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/virus_table_PE_fasta.tabular Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,4 @@ +Species Species TaxID Species sequences Species sequences (stringent) Genus Genus sequences Genus sequences (stringent) +Cassava brown streak virus 137758 45 45 Ipomovirus +Ugandan cassava brown streak virus 946046 30 29 Ipomovirus +Tobacco etch virus 12227 25 23 Potyvirus
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/virus_table_PE_fastq.tabular Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,4 @@ +Species Species TaxID Species sequences Species sequences (stringent) Genus Genus sequences Genus sequences (stringent) +Cassava brown streak virus 137758 45 45 Ipomovirus +Ugandan cassava brown streak virus 946046 28 28 Ipomovirus +Tobacco etch virus 12227 21 19 Potyvirus
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/virus_table_SE_fastq.tabular Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,4 @@ +Species Species TaxID Species sequences Species sequences (stringent) Genus Genus sequences Genus sequences (stringent) +Cassava brown streak virus 137758 45 45 Ipomovirus +Ugandan cassava brown streak virus 946046 29 29 Ipomovirus +Tobacco etch virus 12227 23 20 Potyvirus
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/kaiju_databases.loc.sample Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,13 @@ +# This is a tab-separated file listing any Kaiju databases +# installed locally to offer via Galaxy. +# +# - Column 1 - value, the key which Galaxy will record in DB +# - Column 2 - name, the text caption which Galaxy show users +# - Column 3 - path, the directory name (which will contain +# files named ``kaiju_library.fmi``, ``names.dmp`` and +# ``nodes.dmp`` (the later being NCBI taxonomy files). +# +# e.g. +# +# plants_dec_2017(tab)Plants (December 2017)(tab)/mnt/shared/kaiju_db/plants_2017_12/ +#
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/kraken_databases.loc.sample Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,14 @@ +# This is a tab-separated file listing any Kraken databases +# installed locally to offer via Galaxy. +# +# - Column 1 - value, the key which Galaxy will record in DB +# - Column 2 - name, the text caption which Galaxy show users +# - Column 3 - path, the directory name (which will contain +# files named ``database.idx``, ``database.kdb`` and a +# sub-directory named taxonomy containing files from the +# NCBI named ``names.dmp`` and ``nodes.dmp`` +# +# e.g. +# +# plants_dec_2017(tab)Plants (December 2017)(tab)/mnt/shared/kraken_db/plants_2017_12/ +#
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_data_table_conf.xml.sample Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,15 @@ +<?xml version="1.0"?> +<tables> + <!-- Locations of Kraken databases --> + <!-- This is intended to match the devteam/kraken suite --> + <table name="kraken_databases" comment_char="#"> + <columns>value, name, path</columns> + <file path="tool-data/kraken_databases.loc" /> + </table> + <!-- Locations of Kaiju databses --> + <!-- This is intended to match any kaiju-only wrapper --> + <table name="kaiju_databases" comment_char="#"> + <columns>value, name, path</columns> + <file path="tool-data/kaiju_databases.loc" /> + </table> +</tables>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_data_table_conf.xml.test Wed Mar 14 12:46:57 2018 -0400 @@ -0,0 +1,15 @@ +<?xml version="1.0"?> +<tables> + <!-- Locations of Kraken databases --> + <!-- This is intended to match the devteam/kraken suite --> + <table name="kraken_databases" comment_char="#"> + <columns>value, name, path</columns> + <file path="${__HERE__}/test-data/kraken_databases.loc" /> + </table> + <!-- Locations of Kaiju databses --> + <!-- This is intended to match any kaiju-only wrapper --> + <table name="kaiju_databases" comment_char="#"> + <columns>value, name, path</columns> + <file path="${__HERE__}/test-data/kaiju_databases.loc" /> + </table> +</tables>