Mercurial > repos > abaizan > kodoja

comparison tool-data/kraken_databases.loc.sample @ 1:4554fcd4ef6d draft

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v0.0.6
author peterjc
date Wed, 05 Sep 2018 10:44:57 -0400
parents 18fe33eb7775
children d4111d1de76f
comparison
equal deleted inserted replaced
0:18fe33eb7775 1:4554fcd4ef6d
6 # - Column 3 - path, the directory name (which will contain 6 # - Column 3 - path, the directory name (which will contain
7 # files named ``database.idx``, ``database.kdb`` and a 7 # files named ``database.idx``, ``database.kdb`` and a
8 # sub-directory named taxonomy containing files from the 8 # sub-directory named taxonomy containing files from the
9 # NCBI named ``names.dmp`` and ``nodes.dmp`` 9 # NCBI named ``names.dmp`` and ``nodes.dmp``
10 # 10 #
11 # e.g. 11 # e.g. using the database provided with the kraken-using tool
12 # kodoja at https://doi.org/10.5281/zenodo.1406071
12 # 13 #
13 # plants_dec_2017(tab)Plants (December 2017)(tab)/mnt/shared/kraken_db/plants_2017_12/ 14 # kodojaDB_v1.0_kraken(tab)KodojaDB v1.0 (kraken), Sept 2018(tab)/mnt/shared/data/kodojaDB_v1.0/krakenDB
14 #