Mercurial > repos > althonos > gecco
annotate test-data/sideload.json @ 19:cc91d730cc4f draft
Fix syntax of Galaxy script for GECCO
author | althonos |
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date | Mon, 16 Jan 2023 18:35:56 +0000 |
parents | 56b924f62165 |
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1 { |
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2 "records": [ |
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3 { |
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4 "name": "BGC0001866.1", |
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5 "subregions": [ |
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6 { |
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7 "details": { |
14 | 8 "alkaloid_probability": "0.010", |
9 "average_p": "0.996", | |
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10 "max_p": "1.000", |
14 | 11 "nrp_probability": "0.140", |
12 "polyketide_probability": "0.960", | |
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13 "ripp_probability": "0.000", |
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14 "saccharide_probability": "0.000", |
14 | 15 "terpene_probability": "0.010" |
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16 }, |
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17 "end": 32979, |
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18 "label": "Polyketide", |
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19 "start": 347 |
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20 } |
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21 ] |
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22 } |
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23 ], |
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24 "tool": { |
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25 "configuration": { |
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26 "cds": "3", |
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27 "e-filter": "None", |
14 | 28 "edge-distance": "0", |
29 "mask": "False", | |
19 | 30 "no-pad": "False", |
31 "p-filter": "1e-09", | |
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32 "postproc": "'gecco'", |
14 | 33 "threshold": "0.8" |
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34 }, |
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35 "description": "Biosynthetic Gene Cluster prediction with Conditional Random Fields.", |
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36 "name": "GECCO", |
19 | 37 "version": "0.9.6" |
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38 } |
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39 } |