Mercurial > repos > althonos > gecco

comparison test-data/BGC0001866.sideload.json @ 20:64b724dd8d04 draft

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Regenerate Galaxy test files with Pyrodigal `v2.1.0`
author althonos
date Mon, 27 Mar 2023 13:32:49 +0000
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19:cc91d730cc4f 20:64b724dd8d04
1 {
2 "records": [
3 {
4 "name": "BGC0001866.1",
5 "subregions": [
6 {
7 "details": {
8 "alkaloid_probability": "0.010",
9 "average_p": "0.996",
10 "max_p": "1.000",
11 "nrp_probability": "0.140",
12 "polyketide_probability": "0.960",
13 "ripp_probability": "0.000",
14 "saccharide_probability": "0.000",
15 "terpene_probability": "0.010"
16 },
17 "end": 32979,
18 "label": "Polyketide",
19 "start": 347
20 }
21 ]
22 }
23 ],
24 "tool": {
25 "configuration": {
26 "cds": "3",
27 "e-filter": "None",
28 "edge-distance": "0",
29 "mask": "False",
30 "no-pad": "False",
31 "p-filter": "1e-09",
32 "postproc": "'gecco'",
33 "threshold": "0.8"
34 },
35 "description": "Biosynthetic Gene Cluster prediction with Conditional Random Fields.",
36 "name": "GECCO",
37 "version": "0.9.6"
38 }
39 }