--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/chromeister/bin/recompute_scores.sh	Wed Dec 12 07:18:40 2018 -0500
@@ -0,0 +1,64 @@
+#!/usr/bin/env bash
+
+if [ $# -ne 1 ]; then
+   echo " ==== ERROR ... you called this script inappropriately."
+   echo ""
+   echo "   usage:  $0 <#threads>"
+   echo ""
+   exit -1
+fi
+
+BINDIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
+THREADS=$1
+
+
+for p in */;
+do
+
+	echo "Entering $p"
+	cd $p
+
+
+
+	thepaths=()
+	n=0
+	# Grab the routes
+	for i in *.mat ;
+	do
+
+	        thepaths[$n]=$i
+        	n=`expr $n + 1`
+
+	done
+
+	i=0
+	aux=0
+	for ((i=0; i < $n ; i+=$THREADS))
+	do
+		aux=$i
+		for ((j=0; j<$THREADS; j++))
+		do
+			if [ "$aux" -lt "$n" ]; then
+				echo "Recomputing ${thepaths[$aux]}"
+				goodpath=${thepaths[$aux]%.mat}
+				Rscript $BINDIR/compute_score.R ${thepaths[$aux]} > ${goodpath}.scr.txt &
+				aux=`expr $aux + 1`
+			fi
+		done
+
+		for job in `jobs -p`
+		do
+		    #echo $job
+		    wait $job
+		done
+		
+	done
+
+
+	echo "Exiting $p"
+	cd ..
+
+
+done
+
+