Mercurial > repos > anmoljh > activity_files_merge
comparison merge_activity_files.xml @ 0:b06d2e06b740 draft
planemo upload commit a1f4dd8eb560c649391ada1a6bb9505893a35272
| author | anmoljh |
|---|---|
| date | Thu, 31 May 2018 11:24:57 -0400 |
| parents | |
| children | 0a71d32d6e51 |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:b06d2e06b740 |
|---|---|
| 1 <tool id="merge_activity_files" name="Merge Activity files" version="1.0"> | |
| 2 <description>"Merge data files of Active and Inactive compounds"</description> | |
| 3 <stdio> | |
| 4 <exit_code range="1:" /> | |
| 5 </stdio> | |
| 6 <command interpreter="perl">merge_activity_files.pl $Input1 $Activity1 $Input2 $Activity2 $Merged_file</command> | |
| 7 <inputs> | |
| 8 <param format="csv" name="Input1" type="data" label="Descriptor File 1" help="Upload Active/Inactive descriptor file in csv format"/> | |
| 9 <param name="Activity1" type="text" value="Active" label="Select type of molecules" help="write something which defines data eg active,positive,inactive,negative,etc." > | |
| 10 <validator type="empty_field" message="This field can't be left blank"/> | |
| 11 </param> | |
| 12 <param format="txt" name="Input2" type="data" label="Descriptor File 2" help="Upload Active/Inactive descriptor file in csv format"/> | |
| 13 <param name="Activity2" type="text" value="Inactive" label="Select type of molecules" help="write something which defines data eg active,positive,inactive,negative,etc."> | |
| 14 <validator type="empty_field" message="This field can't be left blank"/> | |
| 15 </param> | |
| 16 </inputs> | |
| 17 <outputs> | |
| 18 <data format="csv" name="Merged_file" label="Merged Mega Descriptor File"/> | |
| 19 </outputs> | |
| 20 <tests> | |
| 21 <test> | |
| 22 <param name="Input1" value="actives_with_names.csv" /> | |
| 23 <param name="Activity1" value="Active" /> | |
| 24 <param name="Input2" value="inactives_with_names.csv" /> | |
| 25 <param name="Activity2" value="Inactive" /> | |
| 26 <output name="Merged_file" file="merged.csv" compare="sim_size" delta="90000000" /> | |
| 27 </test> | |
| 28 </tests> | |
| 29 <help>Provide descriptor files of active/positive and inactive/negative molecules and assign them properly.</help> | |
| 30 </tool> |