Mercurial > repos > anton > vcfgeno2haplo

comparison test-data/vcfgeno2haplo-test1.vcf @ 0:e19406b6e652

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Imported from capsule None
author anton
date Wed, 11 Jun 2014 17:10:52 -0400
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-1:000000000000 0:e19406b6e652
1 ##fileformat=VCFv4.1
2 ##fileDate=20140610
3 ##source=Dan
4 ##reference=file:///galaxy/data/phiX/sam_index/phiX.fa
5 ##filter="AF > .001"
6 ##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
7 ##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
8 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
9 ##FORMAT=<ID=AC,Number=.,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
10 ##FORMAT=<ID=AF,Number=.,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
11 ##FORMAT=<ID=NC,Number=.,Type=String,Description="Nucleotide and indel counts">
12 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT groupA groupB