initial commit

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# Committer: Arkarachai Fungtammasan <arkarachaifungtammasan@Arkarachai-Fungtammasans-MacBook-Pro.local>
#
# On branch master
# Changes to be committed:
#   (use "git reset HEAD <file>..." to unstage)
#
#	new file:   GenotypeTRcorrection.py
#	new file:   GenotypingSTR.xml
#	new file:   PEsortedSAM2readprofile.py
#	new file:   PEsortedSAM2readprofile.xml
#	new file:   changespacetounderscore_readname.py
#	new file:   combinedprobforallelecombination.py
#	new file:   combineprobforallelecombination.xml
#	new file:   fetchflank.xml
#	new file:   heteroprob.py
#	new file:   microsatcompat.py
#	new file:   microsatcompat.xml
#	new file:   microsatellite.py
#	new file:   microsatellite.xml
#	new file:   microsatpurity.py
#	new file:   microsatpurity.xml
#	new file:   pair_fetch_DNA_ff.py
#	new file:   probvalueforhetero.xml
#	new file:   profilegenerator.py
#	new file:   profilegenerator.xml
#	new file:   readdepth2sequencingdepth.xml
#	new file:   sequencingdepthconversion_G.py
#	new file:   space2underscore_readname.xml
#	new file:   test-data/.DS_Store
#	new file:   test-data/C_sample_fastq
#	new file:   test-data/C_sample_snoope
#	new file:   test-data/PCRinclude.allrate.bymajorallele
#	new file:   test-data/combineprob_out.txt
#	new file:   test-data/microsatcompat_in.txt
#	new file:   test-data/microsatcompat_out.txt
#	new file:   test-data/microsatellite_flanking_L.fastq
#	new file:   test-data/microsatellite_flanking_R.fastq
#	new file:   test-data/microsatpurity_in.txt
#	new file:   test-data/microsatpurity_out.txt
#	new file:   test-data/nice1tab.py
#	new file:   test-data/probvalueforhetero_in.txt
#	new file:   test-data/probvalueforhetero_out.txt
#	new file:   test-data/profilegenerator_in.txt
#	new file:   test-data/profilegenerator_out.txt
#	new file:   test-data/readdepth2seqdepth.out
#	new file:   test-data/samplePESAM_2_profile_C.txt
#	new file:   test-data/sampleTRgenotypingcorrection
#	new file:   test-data/sampleTRprofile_C.txt
#	new file:   test-data/samplefq.snoope
#	new file:   test-data/samplefq.snoope.new
#	new file:   test-data/sampleprofilegenerator_in
#	new file:   test-data/sampleprofilegenerator_out
#	new file:   test-data/samplesortedPESAM_C.sam
#	new file:   test-data/shifted.2bit
#