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1 initial commit
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2
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3 # Please enter the commit message for your changes. Lines starting
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4 # with '#' will be ignored, and an empty message aborts the commit.
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5 #
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6 # Committer: Arkarachai Fungtammasan <arkarachaifungtammasan@Arkarachai-Fungtammasans-MacBook-Pro.local>
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7 #
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8 # On branch master
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9 # Changes to be committed:
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10 # (use "git reset HEAD <file>..." to unstage)
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11 #
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12 # new file: GenotypeTRcorrection.py
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13 # new file: GenotypingSTR.xml
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14 # new file: PEsortedSAM2readprofile.py
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15 # new file: PEsortedSAM2readprofile.xml
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16 # new file: changespacetounderscore_readname.py
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17 # new file: combinedprobforallelecombination.py
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18 # new file: combineprobforallelecombination.xml
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19 # new file: fetchflank.xml
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20 # new file: heteroprob.py
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21 # new file: microsatcompat.py
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22 # new file: microsatcompat.xml
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23 # new file: microsatellite.py
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24 # new file: microsatellite.xml
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25 # new file: microsatpurity.py
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26 # new file: microsatpurity.xml
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27 # new file: pair_fetch_DNA_ff.py
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28 # new file: probvalueforhetero.xml
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29 # new file: profilegenerator.py
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30 # new file: profilegenerator.xml
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31 # new file: readdepth2sequencingdepth.xml
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32 # new file: sequencingdepthconversion_G.py
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33 # new file: space2underscore_readname.xml
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34 # new file: test-data/.DS_Store
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35 # new file: test-data/C_sample_fastq
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36 # new file: test-data/C_sample_snoope
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37 # new file: test-data/PCRinclude.allrate.bymajorallele
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38 # new file: test-data/combineprob_out.txt
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39 # new file: test-data/microsatcompat_in.txt
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40 # new file: test-data/microsatcompat_out.txt
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41 # new file: test-data/microsatellite_flanking_L.fastq
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42 # new file: test-data/microsatellite_flanking_R.fastq
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43 # new file: test-data/microsatpurity_in.txt
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44 # new file: test-data/microsatpurity_out.txt
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45 # new file: test-data/nice1tab.py
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46 # new file: test-data/probvalueforhetero_in.txt
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47 # new file: test-data/probvalueforhetero_out.txt
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48 # new file: test-data/profilegenerator_in.txt
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49 # new file: test-data/profilegenerator_out.txt
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50 # new file: test-data/readdepth2seqdepth.out
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51 # new file: test-data/samplePESAM_2_profile_C.txt
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52 # new file: test-data/sampleTRgenotypingcorrection
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53 # new file: test-data/sampleTRprofile_C.txt
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54 # new file: test-data/samplefq.snoope
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55 # new file: test-data/samplefq.snoope.new
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56 # new file: test-data/sampleprofilegenerator_in
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57 # new file: test-data/sampleprofilegenerator_out
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58 # new file: test-data/samplesortedPESAM_C.sam
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59 # new file: test-data/shifted.2bit
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60 #
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