view test-data/counts.tab @ 0:6b990f6c6ba9 draft

planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/deseq2_normalization commit 9dfb5a5331b87d213f495febbfccff0f54becb73
author artbio
date Mon, 08 Jan 2018 04:21:24 -0500
parents
children
line wrap: on
line source

Geneid	2: Oocyte 1: accepted_hits	3: Oocyte 2: accepted_hits	4: Pronuclei 1: accepted_hits	5: pronuclei 2: accepted_hits	6: Pronuclei 3: accepted_hits
NM_001195025	0	0	0	0	0
NM_028778	0	0	0	0	0
NM_001290393	0	0	0	0	0
NM_008922	3133	2276	2288	2659	820
NM_175370	4	22	7	16	9
NM_001290390	0	0	0	0	0
NM_175642	977	1711	1013	459	430
NM_001290392	0	0	0	0	0
NM_027671	0	0	0	0	0
NM_178884	0	0	0	2	3
NM_199021	332	413	1436	836	1018
NM_198680	0	0	0	0	0
NM_011465	0	4	0	0	0
NM_130890	0	0	0	0	0
NM_001113393	0	0	0	0	0
NM_001113392	0	0	0	0	0
NM_001113391	19	3	88	15	31
NM_031162	0	0	0	0	0
NR_103716	0	0	0	0	0
NM_001160371	0	0	0	0	0
NM_177834	1	3	2	0	1
NM_145381	606	445	367	306	259
NM_177173	0	0	0	0	0
NM_001160369	0	0	0	0	0
NM_001160370	2	21	9	8	25
NM_001289497	0	0	0	0	0
NM_027974	0	0	6	7	8
NM_133235	74	23	0	2	29
NM_028096	77	87	2	0	17
NM_201365	1	0	0	0	0
NM_001126046	0	0	0	0	0
NM_001081198	31	2	144	25	50
NM_001160386	890	1574	1226	622	737
NM_009418	456	459	774	531	484
NM_001114663	369	291	353	202	300
NM_001252070	346	629	463	324	296
NR_045151	0	0	0	0	0
NM_001081050	93	63	35	62	68
NM_007642	0	0	0	0	0
NM_025728	0	0	0	0	0
NM_029160	0	0	0	0	0
NM_175210	290	213	346	233	206
NM_010154	31	0	23	0	28
NM_175291	0	0	0	0	0
NM_010472	265	93	1666	1033	1618
NM_023314	0	0	20	2	3
NM_027456	0	0	0	0	0
NM_030184	5	2	11	0	9
NM_009183	0	0	0	0	0
NM_011066	40	82	12	50	12
NM_145519	32	39	140	102	139
NM_173760	8045	15205	6907	4043	3535
NM_172851	0	0	0	0	0
NM_019933	125	2	54	107	23
NM_176957	0	0	0	0	0
NM_001081756	0	0	0	0	0
NM_181750	1448	678	1651	1708	1403
NM_019777	0	0	0	9	8
NM_172484	0	0	0	0	0
NM_028320	46	99	70	203	193
NM_021605	790	624	949	1111	656
NM_173437	1290	1660	1131	1056	1119
NM_001287179	2333	1539	2559	1970	1893
NM_175443	0	0	0	0	0
NM_007495	0	0	0	0	0
NM_022312	0	0	0	0	0
NM_001081290	3128	1917	1875	1574	1278
NM_013862	79	46	236	144	82
NM_001205204	0	0	0	0	0
NM_001159525	0	0	0	0	0
NM_023041	1	2	2	0	8
NM_022563	464	125	427	414	431
NM_011880	0	0	0	0	0
NM_026626	31	7	0	0	4
NM_001199003	0	0	0	0	0
NM_027188	248	307	359	185	728
NM_001243792	0	0	1	0	0
NM_133684	2924	5872	2392	2087	1746
NM_001011874	88	39	28	13	0
NM_001159750	0	0	0	0	0
NM_001159751	3	0	0	0	0
NM_001195662	0	0	1	0	0
NM_001177795	0	0	0	0	0
NM_133826	2265	3916	2743	1710	1934
NM_011541	0	0	0	0	0
NM_021374	0	0	0	0	0
NM_001290372	0	0	0	0	0
NM_001244693	0	0	0	0	0
NM_001244692	0	0	0	0	0
NR_045189	0	0	0	0	0
NR_045188	0	0	0	0	0
NM_173868	0	0	0	0	0
NR_015470	62	92	217	159	174
NM_133220	0	0	0	0	0
NM_145692	2	12	6	16	0
NM_026493	37	93	10	3	90
NR_110971	0	0	0	0	0
NM_177547	0	0	0	0	0
NM_029525	0	0	0	0	6
NM_001033636	11	24	11	13	12
NM_001077695	0	0	0	0	0
NM_001302702	0	0	0	0	0
NM_001081209	0	4	2	5	8
NM_172841	76	91	564	193	377
NM_172294	0	0	0	0	0
NM_001198565	0	0	0	0	0
NM_001198566	0	0	0	0	0
NM_008678	2	5	1	7	7
NM_010164	12	17	10	4	26
NM_001252192	0	0	0	0	0
NM_001098528	62	77	55	15	31
NM_025303	4	1	6	3	2
NM_133832	7337	7347	4876	3469	4358
NM_001033288	15	88	8	31	4
NM_001111272	0	0	0	0	0
NM_026456	1919	1737	2756	2292	2722
NM_020604	35	18	27	0	33
NR_130314	7	11	1	5	7
NM_153154	8	2	18	2	2
NM_153179	30	115	130	253	155
NM_001077353	0	0	0	0	0
NM_001288617	0	0	0	0	0
NM_010356	0	0	0	0	0
NM_023872	0	0	0	0	0
NM_001160139	0	0	0	0	0
NM_183018	0	0	0	0	0
NM_001012623	0	0	0	0	0
NM_053270	0	0	0	0	0
NM_001012624	0	0	0	0	0
NM_001012625	0	0	0	0	0
NR_110972	0	0	0	0	0
NM_028534	22	19	21	15	16
NM_001290683	0	0	0	0	0
NM_007733	111	240	280	157	390
NM_007740	0	0	0	0	0
NM_026719	1136	919	514	473	354
NM_001290691	0	0	0	0	0
NM_001033764	0	0	0	0	0
NM_001013750	0	0	0	0	0
NM_177235	43	87	42	31	10
NM_133833	0	0	0	0	0
NM_134448	0	0	0	0	0
NM_001276764	7	41	28	12	14
NM_183019	9	7	2	0	4
NM_001277076	12	11	68	30	171
NM_001039551	0	0	0	0	0
NM_053186	0	0	0	0	0
NM_198006	817	569	1015	716	250
NM_001289766	0	0	0	0	0
NM_009539	0	0	0	0	0
NM_018872	3195	3604	2254	2124	1074
NM_001289765	0	0	0	0	0
NM_001290721	0	0	0	0	0
NM_001290814	15	15	332	276	280
NM_019570	822	1362	545	366	406
NM_027111	0	0	0	0	0
NM_207228	0	0	0	0	4
NM_001290720	2	0	0	0	0
NR_110976	31	66	36	36	38
NM_008719	579	318	349	375	471
NM_018775	9019	9109	10143	8198	4718
NM_145142	90	126	9	50	74
NM_001123382	0	0	0	0	0
NM_001252202	0	0	0	0	0
NM_001252200	0	0	0	0	0
NM_001294171	0	0	0	0	0
NM_001252201	1	1	0	8	4
NM_008696	0	0	0	0	0
NM_008362	0	0	0	1	1
NM_010743	0	0	0	0	0
NM_001025602	0	0	0	0	0
NM_001033289	0	2	2	0	0
NR_027826	0	0	13	7	0
NM_010879	0	2	0	5	8
NM_001013025	1593	1163	2602	2065	1707
NM_023645	1984	2457	999	754	521
NM_028450	191	153	89	42	62
NM_007737	0	0	0	0	0
NM_028599	2428	2232	2519	1471	1420
NM_019790	35	253	105	32	91
NM_010863	0	0	0	0	0
NM_001290982	0	0	0	0	0
NM_001161817	0	0	0	0	0
NM_001142647	0	0	0	0	0
NM_153556	495	220	503	449	460
NM_146108	0	4	0	4	0
NR_024590	0	0	0	0	0
NM_030025	25	24	53	2	27
NM_172655	0	0	0	0	0
NM_001001883	78	42	147	105	118
NM_001081433	13714	11715	20555	14284	12333
NM_031179	28668	22587	20953	15223	12550
NM_139146	319	329	229	281	209
NM_199007	130	68	41	59	31
NM_001177867	0	0	0	0	0
NM_001164566	0	0	0	0	0
NM_025824	1651	2890	1530	1351	1365
NM_023617	0	0	0	13	0
NM_144882	0	0	0	0	0
NM_172513	4659	3219	7514	5312	4923
NM_001013771	83	15	56	78	26
NM_001033373	558	275	310	335	202
NM_028717	0	0	0	0	0
NM_172406	9	169	346	125	170
NM_001159948	0	0	0	0	0
NM_175200	38	1	14	0	27
NM_001045513	458	696	714	446	384
NM_173444	444	268	408	338	566
NM_139150	0	0	0	0	0
NM_007561	3461	3611	3400	2060	2372
NM_030013	81	78	461	259	121
NM_001037725	7010	12588	6779	4386	4068
NM_001285463	0	0	0	2	0
NM_001077404	0	0	0	0	0
NM_001077405	0	0	0	0	0
NM_001077406	0	0	0	0	0
NM_001077407	0	0	0	0	0
NM_010939	0	0	0	0	0
NM_001077403	0	0	0	0	0
NR_045915	18	6	26	12	11
NM_001285937	0	0	0	0	0
NM_001285936	0	0	0	0	0
NM_001081658	0	0	0	0	0
NR_045914	0	0	2	0	0
NM_011780	0	0	2	0	2
NM_001177600	0	0	0	0	0
NM_009952	0	0	0	0	0
NM_001097644	8358	12958	3205	4179	1194
NM_001039493	1595	1500	1557	806	600
NM_001037726	0	0	0	0	0
NM_133828	0	0	0	0	0
NM_033563	4320	3106	2839	2786	2207
NM_011086	1063	1302	819	660	611
NM_139270	0	6	0	0	0
NM_175510	105	88	116	92	248
NM_021285	0	0	0	0	0
NM_008632	0	0	0	0	0
NM_001039934	0	0	0	0	0
NM_177645	3	3	6	2	1
NM_001122738	0	0	0	0	0
NM_001113387	0	0	0	0	0
NM_001080809	242	234	444	251	327
NM_011770	185	65	205	132	100
NM_177164	137	55	61	153	42
NM_001276408	0	0	0	0	0
NM_001276412	0	0	0	0	0
NM_001276411	0	0	0	0	0
NM_001276410	0	0	0	0	0
NM_001276409	0	0	0	0	0
NM_010233	0	0	0	0	0
NM_001276413	0	0	0	0	0
NM_001005423	109	107	135	113	114
NM_008342	0	0	2	0	0
NM_001045533	627	912	848	621	611
NM_176980	0	7	7	11	0
NM_001170641	0	0	0	0	0
NM_027884	0	0	0	0	0
NR_045311	0	28	0	12	6
NM_001034060	0	0	0	0	0
NM_001289895	0	0	0	0	0
NM_029342	121	101	618	437	801
NM_009518	0	0	0	0	0
NM_001039495	0	0	0	0	0
NM_001159884	0	0	0	0	0
NM_001159885	0	0	0	5	0
NM_001159883	0	0	0	0	1
NM_178055	0	0	0	0	0
NM_020266	0	0	0	0	0
NM_001014974	258	255	657	671	561
NM_176972	4705	5107	5534	3575	3096
NR_037976	0	0	0	0	0
NM_007936	5937	5059	4482	5139	2952
NM_008781	0	20	0	2	0
NM_026713	0	0	0	0	0
NM_001159520	0	0	0	0	0
NM_001004173	149	209	46	32	69
NM_001285927	0	0	0	0	0
NM_009255	23375	35901	13582	11130	7533
NM_172849	41	14	206	175	223
NM_029777	0	0	0	0	0
NM_007735	0	0	0	0	0
NM_007734	145	84	233	74	145
NM_172430	0	0	17	0	24
NM_133975	22051	34509	37255	25194	24917
NM_152915	98	28	4	49	71
NM_001003948	2771	5498	2921	1826	1363
NM_001081746	17	5	11	9	15
NM_013673	30	230	70	34	57
NM_001144993	0	0	0	0	0
NM_001144992	0	0	0	0	0
NM_001172157	0	0	0	0	0
NM_001081082	0	0	0	0	0
NM_008801	252	266	1115	696	1552
NM_153530	0	0	0	0	0
NM_201644	0	0	0	0	0
NM_001110192	0	0	0	0	0
NM_001205391	0	0	0	0	0
NM_019867	0	0	2	0	0
NM_001205392	0	0	0	0	0
NM_201410	0	0	0	0	0
NM_029846	0	0	0	0	0
NM_001110212	0	0	0	0	0
NM_001111314	0	0	23	0	10
NM_146112	0	0	0	0	0
NM_010566	0	0	0	0	0
NR_122078	0	0	0	0	0
NM_201642	0	0	0	0	0
NM_201641	0	0	0	0	0
NM_001110193	0	0	0	0	0
NM_177646	1676	2023	2127	1583	1695
NM_145079	0	0	0	0	0
NM_029269	0	0	0	0	0
NM_139152	0	0	0	0	0
NM_029122	7144	12565	9137	6805	5020
NM_178119	2	0	11	1	0
NM_001037136	0	0	0	0	0
NM_001111312	0	0	0	1	0
NM_001033408	7	15	337	94	165
NM_001243009	0	0	0	0	0
NM_001243008	0	0	0	0	0
NM_023046	0	0	0	0	0
NM_001039126	0	0	0	0	0
NM_207225	338	253	255	319	209
NM_007855	0	0	0	0	0
NM_001271884	0	0	0	0	0
NM_207031	0	0	1	0	2
NM_172463	33	49	16	4	6
NM_008798	0	15	0	10	49
NM_174874	198	166	623	391	381
NR_040467	0	0	0	0	0
NM_028942	0	0	0	0	0
NR_120500	0	29	64	21	0
NM_027584	0	0	0	0	0
NM_001164233	0	0	0	0	0
NM_013626	5	4	14	0	4
NM_011800	468	545	279	171	142
NM_173187	0	0	0	0	0
NM_009399	0	0	0	4	0
NM_013784	1048	1040	1091	709	522
NM_178779	0	0	0	0	0
NM_029349	0	0	0	0	0
NM_001160368	0	0	0	0	0
NM_009741	2	30	37	2	10
NM_133821	96	143	34	154	70
NM_198028	0	0	0	0	0
NM_001160307	0	0	0	0	0
NR_102307	0	0	0	0	0
NR_102306	0	0	0	0	0
NM_172853	0	0	31	0	0
NM_001081386	196	127	135	23	53
NM_001077425	0	0	25	0	20
NM_029709	0	0	0	0	0
NM_001293300	0	0	1	0	0
NM_001293301	0	0	0	0	0
NM_145506	51	29	74	93	85
NM_022327	0	0	0	0	0
NM_001081125	561	547	386	363	493
NM_001113416	1958	3537	2652	1849	1563
NM_001172074	3	2	0	3	2
NM_133186	0	0	0	0	0
NM_001085409	0	0	0	0	0
NM_028439	0	0	0	0	0
NM_178082	0	0	0	0	0
NM_029955	0	0	0	0	0
NM_133748	0	0	0	0	0
NM_001271532	0	0	0	0	0
NM_001271531	0	0	0	0	0
NM_001025156	0	0	0	0	0
NM_027677	0	4	0	7	0
NM_145100	0	0	0	0	0
NM_028135	0	53	47	38	32
NM_001033041	0	0	0	0	0
NM_001285945	0	0	0	0	0
NM_145128	0	2	41	17	17
NM_027678	0	0	0	1	0
NM_177445	331	211	743	896	911
NM_026390	7243	4696	6281	4942	4840
NM_172485	329	281	620	132	133
NM_026976	0	0	0	0	0
NM_009581	8	12	104	100	35
NM_007799	0	0	0	0	0
NM_175382	3678	2665	1498	1021	1118
NM_172510	17	0	40	11	13
NM_001114662	96	270	89	264	374
NM_175294	0	0	0	0	0
NM_001145804	0	0	0	0	0
NM_001081011	107	59	390	242	420
NM_001160318	0	0	0	0	0
NM_001099276	501	295	655	383	501
NM_001160317	0	0	0	0	0
NM_001160316	0	0	0	0	0
NM_182716	0	0	0	0	4
NM_172516	4014	3110	2948	2670	2506
NM_144530	0	0	0	0	0
NM_001276767	0	0	0	0	0
NM_001145300	0	0	0	0	0
NM_001081307	54	66	88	36	109
NM_053106	0	0	0	0	0
NM_001033409	60	20	74	90	130
NM_009307	32	9	96	16	107
NM_001291015	0	0	0	0	0
NM_177642	0	0	0	0	2
NM_030676	0	0	0	0	0
NM_001159769	0	0	0	0	1
NM_011210	0	0	0	0	0
NM_001111316	0	0	0	0	0
NM_001268286	0	0	0	0	0
NM_181347	0	0	0	0	0
NM_001166501	0	1	0	1	2
NM_133239	208	108	490	318	369
NR_040455	0	0	0	0	0
NM_001081027	0	0	0	0	0
NR_040604	0	0	0	0	0
NM_020025	4	0	0	0	0
NM_013835	246	273	188	245	183
NM_145991	821	697	1000	793	573
NR_110891	0	0	0	0	0
NM_001290269	0	0	0	0	0
NM_153171	0	0	0	0	0
NM_001145807	0	0	0	0	0
NM_153539	0	0	0	0	0
NM_008869	0	79	0	0	0
NM_001110146	0	0	0	0	0
NM_024458	0	0	0	0	0
NM_001159730	0	0	0	0	0
NR_040603	0	0	0	0	0
NM_021400	1	1	7	7	0
NM_001024720	0	0	0	0	0
NM_197990	349	280	349	230	506
NM_025819	6926	9248	5296	3462	3625
NM_022018	25	1	32	0	8
NM_001039644	217	371	78	95	129
NM_177756	203	343	319	359	411
NM_175460	333	338	138	59	60
NM_016846	27	110	71	73	43
NM_010877	0	6	24	0	0
NM_007842	43	70	63	14	8
NR_108050	0	0	0	0	0
NR_046171	0	0	0	0	0
NM_009782	47	18	63	2	76
NM_011273	954	1596	2136	1912	1242
NM_021433	2003	3664	2262	1593	1624
NM_177838	0	0	0	0	0
NM_001145781	188	97	300	252	182
NM_001277730	0	0	0	0	0
NM_028250	8	1	79	41	47
NM_001039184	229	224	433	213	354
NM_001134741	3	5	6	3	13
NM_026683	0	0	0	0	0
NM_023141	0	9	0	24	12
NR_027640	1	0	0	0	0
NM_177644	242	184	374	216	270
NM_001159968	0	0	0	0	0
NM_001159965	0	0	0	0	0
NM_001159967	0	0	0	0	0
NM_001159966	0	0	0	0	0
NM_023884	0	0	0	0	0
NM_001085376	89	10	30	92	33
NM_011931	10995	17421	17175	16469	13094
NM_009786	55	48	26	42	34
NM_001038621	529	1119	1262	430	645
NR_038031	0	0	0	0	0
NR_038030	0	0	0	0	0
NM_001162896	0	0	0	0	0
NM_001039482	112	253	251	118	90
NM_080844	2371	2011	1696	1597	1424
NM_001038619	0	0	0	0	0
NM_172646	0	0	0	0	0
NM_008030	37	246	100	70	108
NM_011347	2140	2439	2125	2057	1415
NM_010629	27	17	98	36	61
NM_001293313	0	0	0	0	0
NM_138314	0	0	0	0	0
NM_001081126	2	0	0	0	2
NM_028759	133	131	184	253	450
NM_145512	241	452	271	523	436
NM_175296	21	72	1183	333	1260
NM_001164306	0	14	12	0	7
NM_001160049	0	0	0	0	0
NM_001033344	0	0	0	0	0
NM_198932	0	0	0	0	0
NM_011137	0	0	0	0	0
NM_030724	61	31	592	463	1066
NM_033652	6	10	76	34	21
NM_175461	0	0	0	0	0
NM_001160261	0	0	0	0	0
NM_001160262	0	0	0	0	0
NM_183355	0	0	0	0	0
NM_008783	0	0	0	0	0
NM_001291509	0	0	0	0	0
NM_001291508	0	0	0	0	0
NM_023284	8286	10536	12399	7957	7008
NM_133806	1017	1697	1226	773	624
NM_001081304	3522	4423	2308	2023	1835
NM_001198955	1615	2689	1879	1141	1077
NM_001109985	145	54	48	46	53
NM_027528	2	0	0	0	0
NM_011070	1429	1183	1293	1140	902
NM_013489	0	0	0	0	0