diff ez_histograms.xml @ 1:fbedb212982d draft

planemo upload for repository https://github.com/artbio/tools-artbio/tree/main/tools/ez_histograms commit 5e25392164eca5585239b62c82b7f6ba326cda6e
author artbio
date Thu, 08 Feb 2024 02:15:11 +0000
parents bdf40b0924cb
children d375c9df9c34
line wrap: on
line diff
--- a/ez_histograms.xml	Wed Feb 07 19:49:56 2024 +0000
+++ b/ez_histograms.xml	Thu Feb 08 02:15:11 2024 +0000
@@ -1,7 +1,7 @@
 <tool id="ez_histograms" name="ez_histograms" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
     <macros>
         <token name="@TOOL_VERSION@">3.4.4</token>
-        <token name="@VERSION_SUFFIX@">0</token>
+        <token name="@VERSION_SUFFIX@">1</token>
         <token name="@PROFILE@">23.0</token>
     </macros>
     <requirements>
@@ -9,7 +9,7 @@
         <requirement type="package" version="1.4.4">r-reshape2</requirement>
         <requirement type="package" version="1.1.4">r-dplyr</requirement>
         <requirement type="package" version="1.3.0">r-scales</requirement>
-        <requirement type="package" version="1.4.6">r-vtable</requirement>
+        <requirement type="package" version="2.4.1">r-psych</requirement>
         <requirement type="package" version="1.7.4">r-optparse</requirement>
     </requirements>
 
@@ -108,6 +108,13 @@
             <output name="pdf" file="single_headed_col.pdf"/>
             <output name="summary" file="summary_6.tsv"/>
        </test>
+        <test expect_num_outputs="2">
+            <param name="file" value="misleading_ids.tsv"/>
+            <param name="plot_options_selector" value="density"/>
+            <param name="xscale" value="cartesian"/>
+            <output name="pdf" file="misleading_ids.pdf"/>
+            <output name="summary" file="summary_7.tsv"/>
+       </test>
     </tests>
     <help><![CDATA[
 **What it does**
@@ -145,7 +152,7 @@
 The ez_histograms Galaxy tool returns
 
 - A pdf file with plots faceted on three columns
-- A tsv file with statistics summary of the variables generated by the R package vtables
+- A tsv file with statistics summary of the variables generated by the R package psych
 
     ]]></help>
     <citations>