Mercurial > repos > astroteam > astronomical_archives

annotate astronomical_archives.py @ 2:7398ea3d9ac4 draft default tip

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planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
author astroteam
date Tue, 26 Mar 2024 10:03:55 +0000
parents 667fc28d803c
children
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1 import errno
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
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2 import functools
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3 import json
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4 import os
2
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5 import re
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6 import signal
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7 import sys
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8 import urllib
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9 from urllib import request
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1
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11 from astropy.coordinates import SkyCoord
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13 import pyvo
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14 from pyvo import DALAccessError, DALQueryError, DALServiceError
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15 from pyvo import registry
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18 MAX_ALLOWED_ENTRIES = 100
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19 MAX_REGISTRIES_TO_SEARCH = 100
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21 ARCHIVES_TIMEOUT_BYPASS = [
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22 "https://datalab.noirlab.edu/tap"
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23 ]
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1
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26 class TimeoutException(Exception):
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27 pass
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30 def timeout(seconds=10, error_message=os.strerror(errno.ETIME)):
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31 def decorator(func):
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32 def _handle_timeout(signum, frame):
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33 raise TimeoutException(error_message)
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34
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35 @functools.wraps(func)
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36 def wrapper(*args, **kwargs):
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37 signal.signal(signal.SIGALRM, _handle_timeout)
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38 signal.alarm(seconds)
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39 try:
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40 result = func(*args, **kwargs)
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41 finally:
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42 signal.alarm(0)
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43 return result
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44
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45 return wrapper
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46
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47 return decorator
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48
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49
0
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50 class Service:
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51 # https://pyvo.readthedocs.io/en/latest/api/pyvo.registry.Servicetype.html
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52
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53 services = {
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54 'TAP': 'tap',
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55 'SIA': 'sia',
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56 'SIA2': 'sia2',
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57 'SPECTRUM': 'spectrum',
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58 'SCS': 'scs',
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59 'LINE': 'line'
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60 }
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61
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62 supported_services = {
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63 'TAP': 'tap'
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64 }
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65
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66 def __init__(self):
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67 pass
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68
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69 @staticmethod
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70 def is_service_supported(service_type) -> bool:
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71 is_supported = True
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72
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73 if service_type not in Service.services.keys():
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74 is_supported = False
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75 elif service_type not in Service.supported_services.keys():
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76 is_supported = False
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77
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78 return is_supported
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79
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80
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81 class Waveband:
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82 # https://pyvo.readthedocs.io/en/latest/api/pyvo.registry.Waveband.html
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83 # https://www.ivoa.net/rdf/messenger/2020-08-26/messenger.html
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84
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85 wavebands = {
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86 'Extreme UV': 'EUV',
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87 'Gamma ray': 'Gamma-ray',
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88 'Infrared': 'Infrared',
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89 'Millimeter': 'Millimeter',
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90 'Neutrino': 'Neutrino',
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91 'Optical': 'Optical',
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92 'Photon': 'Photon',
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93 'Radio': 'Radio',
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94 'Ultra violet': 'UV',
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95 'X-ray': 'X-ray'
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96 }
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97
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98 def __init__(self):
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99 pass
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100
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101 @staticmethod
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102 def is_waveband_supported(waveband) -> bool:
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103 is_supported = True
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104
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105 if waveband not in Waveband.wavebands.keys():
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106 is_supported = False
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107
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108 return is_supported
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109
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110
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111 class TapArchive:
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112 # https://www.ivoa.net/documents/ObsCore/20170509/REC-ObsCore-v1.1-20170509
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113
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114 service_type = Service.services['TAP']
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115
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116 def __init__(self,
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117 id=1,
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118 title="Unknown title",
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119 name="Unknown name",
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120 access_url=""):
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121
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122 self.id = id,
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123 self.title = title,
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124 self.name = name,
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125 self.access_url = access_url
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126 self.initialized = False
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127 self.archive_service = None
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128 self.tables = None
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129
1
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130 @timeout(10)
0
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131 def get_resources(self,
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132 query,
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133 number_of_results,
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134 url_field='access_url'):
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135
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136 resource_list_hydrated = []
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137
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138 error_message = None
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139
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140 if self.initialized:
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141
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142 try:
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143 raw_resource_list = self.archive_service.search(query)
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144
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145 for i, resource in enumerate(raw_resource_list):
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146 if i < number_of_results:
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147 resource_list_hydrated.append(
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148 self._get_resource_object(resource))
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149 else:
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150 break
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151
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152 except DALQueryError:
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153 if self.has_obscore_table():
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154 error_message = "Error in query -> " + query
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155 Logger.create_action_log(
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156 Logger.ACTION_ERROR,
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157 Logger.ACTION_TYPE_DOWNLOAD,
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158 error_message)
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159 else:
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160 error_message = "No obscore table in the archive"
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161 Logger.create_action_log(
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162 Logger.ACTION_ERROR,
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163 Logger.ACTION_TYPE_DOWNLOAD,
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164 error_message)
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165
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166 except DALServiceError:
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167 error_message = "Error communicating with the service"
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168 Logger.create_action_log(
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169 Logger.ACTION_ERROR,
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170 Logger.ACTION_TYPE_DOWNLOAD,
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171 error_message)
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172
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173 except Exception:
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174 error_message = "Unknow error while querying the service"
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175 Logger.create_action_log(
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176 Logger.ACTION_ERROR,
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177 Logger.ACTION_TYPE_DOWNLOAD,
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178 error_message)
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179
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180 return resource_list_hydrated, error_message
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181
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182 def _get_resource_object(self, resource):
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183 resource_hydrated = {}
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184
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185 for key, value in resource.items():
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186 resource_hydrated[key] = value
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187
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188 return resource_hydrated
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189
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190 def initialize(self):
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191 error_message = None
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192
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193 try:
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194 self._get_service()
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195
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196 if self.archive_service:
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197 self._set_archive_tables()
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198 self.initialized = True
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199
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200 except DALAccessError:
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201 error_message = \
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202 "A connection to the service could not be established"
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203 Logger.create_action_log(
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204 Logger.ACTION_ERROR,
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205 Logger.ACTION_TYPE_ARCHIVE_CONNECTION,
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206 error_message)
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207
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208 except Exception:
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209 error_message = "Unknow error while initializing TAP service"
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210 Logger.create_action_log(
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211 Logger.ACTION_ERROR,
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212 Logger.ACTION_TYPE_ARCHIVE_CONNECTION,
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213 error_message)
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214
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215 return self.initialized, error_message
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216
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217 def _get_service(self):
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218 if self.access_url:
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219 self.archive_service = pyvo.dal.TAPService(self.access_url)
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220
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221 def _set_archive_tables(self):
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222
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223 self.tables = []
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224
2
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225 try:
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226 for table in self.archive_service.tables:
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227 archive_table = {
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228 'name': table.name,
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229 'type': table.type,
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230 'fields': None
0
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231 }
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232
2
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233 fields = []
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234
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235 for table_field in table.columns:
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236 field = {
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237 'name': table_field.name,
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238 'description': table_field.description,
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239 'unit': table_field.unit,
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240 'datatype': table_field.datatype.content
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241 }
0
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242
2
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243 fields.append(field)
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244
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245 archive_table['fields'] = fields
0
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246
2
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247 self.tables.append(archive_table)
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248
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249 # Exception is raised when a table schema is missing
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250 # Missing table will be omitted so no action needed
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251 except DALServiceError:
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252 pass
0
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253
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254 def _is_query_valid(self, query) -> bool:
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255 is_valid = True
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256
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257 attribute_from = 'from'
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258 attribute_where = 'where'
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259
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260 idx_from = query.index(attribute_from)
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261 idx_where = query.index(attribute_where)
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262
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263 table_name = ''
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264
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265 for idx in range(idx_from + len('from') + 1, idx_where):
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266 table_name = table_name + query[idx]
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267
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268 if not next(
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269 (item for item in self.tables if
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270 item["name"] == table_name),
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271 False):
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272
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273 is_valid = False
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274
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275 return is_valid
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276
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277 def has_obscore_table(self) -> bool:
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278 has_obscore_table = self._has_table("ivoa.obscore")
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279
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280 return has_obscore_table
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281
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282 def _has_table(self, table_name) -> bool:
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283 _has_table = False
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284
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285 _has_table = next(
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286 (item for item in self.tables if item["name"] == table_name),
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287 False)
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288
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289 return _has_table
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290
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291 def get_archive_name(self, archive_type):
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292 try:
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293 if archive_type == 'registry':
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294 name = str(self.title).strip("',()")
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295 else:
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296 name = self.access_url
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297 except Exception:
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298 name = 'Unknown archive title'
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299
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300 return name
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301
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302
1
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303 class ConeService(TapArchive):
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304
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305 def _get_service(self):
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306 if self.access_url:
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307 self.archive_service = pyvo.dal.SCSService(self.access_url)
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308
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309 def get_resources_from_service_list(self, service_list, target, radius):
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310
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311 resource_list_hydrated = []
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312
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313 for service in service_list:
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314 resources = service.search(target, radius)
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315 for i in range(resources.__len__()):
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316 resource_url = resources.getrecord(i).getdataurl()
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317 if resource_url:
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318 resource_list_hydrated.append(resource_url)
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319
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320 return resource_list_hydrated
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321
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322
0
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323 class RegistrySearchParameters:
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324
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325 def __init__(self, keyword=None, waveband=None, service_type=None):
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326 self.keyword = keyword
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327 self.waveband = waveband
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328 self.service_type = service_type
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329
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330 def get_parameters(self):
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331
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332 parameters = {
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333 'keywords': '',
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334 'waveband': '',
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335 'service_type': ''
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336 }
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337
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338 if self.keyword:
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339 parameters['keywords'] = self.keyword
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340
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341 if Waveband.is_waveband_supported(self.waveband):
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342 parameters['waveband'] = \
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343 Waveband.wavebands[self.waveband]
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344
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345 if Service.is_service_supported(self.service_type):
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346 parameters['service_type'] = \
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347 Service.services[self.service_type]
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348 else:
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349 parameters['service_type'] = Service.services['TAP']
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350
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351 return parameters
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352
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353
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354 class Registry:
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355
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356 def __init__(self):
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357 pass
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358
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359 @staticmethod
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360 def search_registries(rsp: RegistrySearchParameters,
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361 number_of_registries):
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362
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363 parameters = rsp.get_parameters()
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364
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365 keywords = parameters['keywords']
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366 waveband = parameters['waveband']
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367 service_type = parameters['service_type']
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368
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369 if not waveband:
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370 registry_list = registry.search(
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371 keywords=keywords,
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372 servicetype=service_type)
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373 else:
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374 registry_list = registry.search(
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375 keywords=keywords,
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376 waveband=waveband,
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377 servicetype=service_type)
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378
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379 if registry_list:
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380 registry_list = Registry._get_registries_from_list(
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381 registry_list,
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382 number_of_registries)
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383
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384 return registry_list
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385
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386 @staticmethod
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387 def _get_registries_from_list(registry_list, number_of_registries):
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388
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389 archive_list = []
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390
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391 for i, ivoa_registry in enumerate(registry_list):
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392 if i < number_of_registries:
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393 archive = TapArchive(ivoa_registry.standard_id,
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394 ivoa_registry.res_title,
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395 ivoa_registry.short_name,
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396 ivoa_registry.access_url)
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397
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398 archive_list.append(archive)
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399
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400 return archive_list
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401
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402
1
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403 class ConeServiceRegistry:
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404
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405 def __init__(self):
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406 pass
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407
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408 @staticmethod
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409 def search_services(keyword, number_of_registries):
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410
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411 service_list = []
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412
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413 service_list = registry.search(servicetype="scs", keywords=keyword)
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414
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415 if service_list:
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416 service_list = service_list[:number_of_registries]
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diff changeset
417
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418 return service_list
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419
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420
0
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421 class TapQuery:
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422
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423 def __init__(self, query):
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424 self.raw_query = query
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425
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426 def get_query(self):
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427 return urllib.parse.unquote(self.raw_query).replace("+", " ")
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428
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429
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430 class BaseADQLQuery:
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431
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432 def __init__(self):
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433 pass
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434
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435 def _get_order_by_clause(self, order_type):
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436 order_by_clause = 'ORDER BY ' + order_type
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437
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438 return order_by_clause
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439
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440 def _get_where_clause(self, parameters):
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441 where_clause = ''
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442 is_first_statement = True
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443
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444 for key, value in parameters.items():
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445
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446 if value != '':
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447 statement = str(key) + ' = ' + '\'' + str(value) + '\' '
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448
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449 if is_first_statement:
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450 is_first_statement = False
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451 where_clause += 'WHERE '
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452 else:
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453 statement = 'AND ' + statement
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454
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455 where_clause += statement
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456
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457 return where_clause
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458
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459
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460 class ToolRunner:
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461
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462 def __init__(self,
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463 run_parameters,
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diff changeset
464 output,
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465 output_csv,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
466 output_html,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
467 output_basic_html,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
468 output_error):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
469
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
470 self._raw_parameters_path = run_parameters
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
471 self._json_parameters = json.load(open(run_parameters, "r"))
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
472 self._archive_type = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
473 self._query_type = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
474 self._archives = []
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
475 self._adql_query = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
476 self._services_access_url = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
477 self._url_field = 'access_url'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
478 self._number_of_files = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
479 self._is_initialised = False
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
480
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
481 self._csv_file = False
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
482 self._image_file = False
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
483 self._html_file = False
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
484 self._basic_html_file = False
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
485
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
486 self._output = output
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
487 self._output_csv = output_csv
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
488 self._output_html = output_html
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
489 self._output_basic_html = output_basic_html
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
490 self._output_error = output_error
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
491
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
492 self._set_run_main_parameters()
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
493
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
494 self._is_initialised, error_message = self._set_archive()
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
495
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
496 if self._is_initialised and error_message is None:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
497 self._set_query()
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
498 self._set_output()
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
499
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
500 def _set_run_main_parameters(self):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
501
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
502 qs = "query_section"
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
503 qsl = "query_selection"
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
504
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
505 self._archive_type = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
506 self._json_parameters['archive_selection']['archive_type']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
507 self._query_type = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
508 self._json_parameters[qs][qsl]['query_type']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
509
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
510 def _set_archive(self):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
511
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
512 error_message = None
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
513
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
514 if self._archive_type == 'archive':
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
515 self._service_access_url =\
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
516 self._json_parameters['archive_selection']['archive']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
517
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
518 self._archives.append(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
519 TapArchive(access_url=self._service_access_url))
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
520
2
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
521 elif self._archive_type == 'custom':
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
522 self._service_access_url = \
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
523 self._json_parameters['archive_selection']['access_url']
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
524
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
525 if Utils.is_valid_url(self._service_access_url):
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
526 self._archives.append(
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
527 TapArchive(access_url=self._service_access_url))
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
528 else:
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
529 error_message = "archive access url is not a valid url"
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
530 Logger.create_action_log(
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
531 Logger.ACTION_ERROR,
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
532 Logger.ACTION_TYPE_ARCHIVE_CONNECTION,
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
533 error_message)
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
534
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
535 else:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
536 keyword = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
537 self._json_parameters['archive_selection']['keyword']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
538 waveband = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
539 self._json_parameters['archive_selection']['wavebands']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
540 service_type = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
541 self._json_parameters['archive_selection']['service_type']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
542
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
543 rsp = RegistrySearchParameters(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
544 keyword=keyword,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
545 waveband=waveband,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
546 service_type=service_type)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
547
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
548 archive_list = Registry.search_registries(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
549 rsp,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
550 MAX_REGISTRIES_TO_SEARCH)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
551
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
552 if len(archive_list) >= 1:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
553 self._archives = archive_list
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
554 else:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
555 error_message = "no archive matching search parameters"
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
556 Logger.create_action_log(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
557 Logger.ACTION_ERROR,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
558 Logger.ACTION_TYPE_ARCHIVE_CONNECTION,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
559 error_message)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
560
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
561 if error_message is None:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
562
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
563 self._archives[:] = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
564 [archive for archive in self._archives if
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
565 archive.initialize()[0]]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
566
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
567 if len(self._archives) >= 1:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
568 return True, None
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
569 else:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
570 return False, \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
571 "no archive matching search" \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
572 " parameters could be initialized"
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
573
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
574 else:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
575 return False, error_message
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
576
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
577 def _set_cone_service(self):
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
578
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
579 qs = 'query_section'
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
580 qsl = 'query_selection'
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
581 csts = 'cone_search_target_selection'
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
582
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
583 error_message = None
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
584 is_service_initialised = True
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
585
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
586 keyword = self._json_parameters[qs][qsl][csts]['keyword']
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
587
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
588 service_list = ConeServiceRegistry.search_services(
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
589 keyword,
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
590 MAX_REGISTRIES_TO_SEARCH)
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
591
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
592 if len(service_list) >= 1:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
593 self._services = service_list
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
594 else:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
595 is_service_initialised = False
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
596 error_message = "no services matching search parameters"
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
597 Logger.create_action_log(
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
598 Logger.ACTION_ERROR,
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
599 Logger.ACTION_TYPE_ARCHIVE_CONNECTION,
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
600 error_message)
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
601
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
602 return is_service_initialised, error_message
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
603
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
604 def _set_query(self):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
605
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
606 qs = 'query_section'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
607 qsl = 'query_selection'
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
608 csts = 'cone_search_target_selection'
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
609 cs = 'cone_section'
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
610 ts = 'target_selection'
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
611 con = 'cone_object_name'
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
612
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
613 if self._query_type == 'obscore_query':
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
614
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
615 dataproduct_type = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
616 self._json_parameters[qs][qsl]['dataproduct_type']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
617 obs_collection = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
618 self._json_parameters[qs][qsl]['obs_collection']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
619 obs_title = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
620 self._json_parameters[qs][qsl]['obs_title']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
621 obs_id = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
622 self._json_parameters[qs][qsl]['obs_id']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
623 facility_name = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
624 self._json_parameters[qs][qsl]['facility_name']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
625 instrument_name = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
626 self._json_parameters[qs][qsl]['instrument_name']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
627 em_min = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
628 self._json_parameters[qs][qsl]['em_min']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
629 em_max = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
630 self._json_parameters[qs][qsl]['em_max']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
631 target_name = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
632 self._json_parameters[qs][qsl]['target_name']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
633 obs_publisher_id = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
634 self._json_parameters[qs][qsl]['obs_publisher_id']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
635 s_fov = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
636 self._json_parameters[qs][qsl]['s_fov']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
637 calibration_level = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
638 self._json_parameters[qs][qsl]['calibration_level']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
639 t_min = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
640 self._json_parameters[qs][qsl]['t_min']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
641 t_max = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
642 self._json_parameters[qs][qsl]['t_max']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
643 order_by = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
644 self._json_parameters[qs][qsl]['order_by']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
645
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
646 if self._json_parameters[qs][qsl][cs][csts][ts] == 'coordinates':
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
647 ra = self._json_parameters[qs][qsl][cs][csts]['ra']
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
648 dec = self._json_parameters[qs][qsl][cs][csts]['dec']
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
649 else:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
650 obs_target = self._json_parameters[qs][qsl][cs][csts][con]
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
651
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
652 if obs_target != 'none' and obs_target is not None:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
653 target = CelestialObject(obs_target)
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
654 target_coordinates = target.get_coordinates_in_degrees()
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
655
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
656 ra = target_coordinates['ra']
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
657 dec = target_coordinates['dec']
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
658 else:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
659 ra = None
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
660 dec = None
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
661
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
662 radius = self._json_parameters[qs][qsl][cs]['radius']
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
663
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
664 if (ra != '' and ra is not None)\
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
665 and (dec != '' and dec is not None)\
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
666 and (radius != '' and radius is not None):
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
667 cone_condition = \
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
668 ADQLConeSearchQuery.get_search_circle_condition(ra,
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
669 dec,
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
670 radius)
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
671 else:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
672 cone_condition = None
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
673
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
674 obscore_query_object = ADQLObscoreQuery(dataproduct_type,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
675 obs_collection,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
676 obs_title,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
677 obs_id,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
678 facility_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
679 instrument_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
680 em_min,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
681 em_max,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
682 target_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
683 obs_publisher_id,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
684 s_fov,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
685 calibration_level,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
686 t_min,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
687 t_max,
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
688 cone_condition,
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
689 order_by)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
690
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
691 self._adql_query = obscore_query_object.get_query()
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
692
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
693 elif self._query_type == 'raw_query':
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
694
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
695 wc = 'where_clause'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
696
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
697 tap_table = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
698 self._json_parameters[qs][qsl]['table']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
699
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
700 where_field = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
701 self._json_parameters[qs][qsl][wc]['where_field']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
702 where_condition = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
703 self._json_parameters[qs][qsl][wc]['where_condition']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
704
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
705 self._url_field = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
706 self._json_parameters[qs][qsl]['url_field']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
707
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
708 self._adql_query = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
709 ADQLTapQuery().get_query(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
710 tap_table,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
711 where_field,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
712 where_condition)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
713 else:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
714 self._adql_query = ADQLObscoreQuery.base_query
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
715
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
716 def _set_cone_query(self):
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
717
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
718 qs = 'query_section'
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
719 qsl = 'query_selection'
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
720 csts = 'cone_search_target_selection'
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
721 ts = 'target_selection'
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
722 con = 'cone_object_name'
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
723
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
724 search_radius = self._json_parameters[qs][qsl]['radius']
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
725 time = None
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
726
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
727 if self._json_parameters[qs][qsl][csts][ts] == 'coordinates':
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
728 ra = self._json_parameters[qs][qsl][csts]['ra']
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
729 dec = self._json_parameters[qs][qsl][csts]['dec']
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
730 time = self._json_parameters[qs][qsl][csts]['time']
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
731 else:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
732 target = CelestialObject(self._json_parameters[qs][qsl][csts][con])
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
733
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
734 target_coordinates = target.get_coordinates_in_degrees()
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
735
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
736 ra = target_coordinates['ra']
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
737 dec = target_coordinates['dec']
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
738
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
739 cone_query_object = ADQLConeSearchQuery(ra, dec, search_radius, time)
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
740
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
741 self._adql_query = cone_query_object.get_query()
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
742
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
743 def _set_output(self):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
744 self._number_of_files = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
745 int(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
746 self._json_parameters['output_section']['number_of_files']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
747 )
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
748
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
749 if self._number_of_files < 1:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
750 self._number_of_files = 1
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
751 elif self._number_of_files > 100:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
752 self._number_of_files = MAX_ALLOWED_ENTRIES
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
753
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
754 output_selection = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
755 self._json_parameters['output_section']['output_selection']
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
756
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
757 if output_selection is not None:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
758 if 'c' in output_selection:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
759 self._csv_file = True
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
760 if 'i' in output_selection:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
761 self._image_file = True
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
762 if 'h' in output_selection:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
763 self._html_file = True
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
764 if 'b' in output_selection:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
765 self._basic_html_file = True
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
766
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
767 def _validate_json_parameters(self, json_parameters):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
768 self._json_parameters = json.load(open(json_parameters, "r"))
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
769
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
770 def run(self):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
771 if self._is_initialised:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
772 error_message = None
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
773 file_url = []
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
774
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
775 archive_name = self._archives[0].get_archive_name(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
776 self._archive_type)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
777
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
778 for archive in self._archives:
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
779 try:
2
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
780
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
781 if archive.access_url in ARCHIVES_TIMEOUT_BYPASS:
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
782 archive.get_resources = \
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
783 timeout(40)(TapArchive.get_resources.__get__(archive)) # noqa: E501
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
784
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
785 _file_url, error_message = archive.get_resources(
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
786 self._adql_query,
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
787 self._number_of_files,
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
788 self._url_field)
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
789
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
790 file_url.extend(_file_url)
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
791 except TimeoutException:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
792 error_message = \
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
793 "Archive is taking too long to respond (timeout)"
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
794 Logger.create_action_log(
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
795 Logger.ACTION_ERROR,
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
796 Logger.ACTION_TYPE_ARCHIVE_CONNECTION,
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
797 error_message)
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
798
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
799 if len(file_url) >= int(self._number_of_files):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
800 file_url = file_url[:int(self._number_of_files)]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
801 break
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
802
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
803 if file_url:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
804
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
805 if self._csv_file:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
806 FileHandler.write_urls_to_output(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
807 file_url,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
808 self._output_csv,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
809 self._url_field)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
810
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
811 if self._image_file:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
812
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
813 try:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
814 fits_file = FileHandler.download_file_from_url(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
815 file_url[0][self._url_field])
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
816
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
817 FileHandler.write_file_to_output(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
818 fits_file,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
819 self._output, "wb")
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
820
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
821 log_message = "from url " +\
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
822 file_url[0][self._url_field]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
823
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
824 Logger.create_action_log(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
825 Logger.ACTION_SUCCESS,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
826 Logger.ACTION_TYPE_DOWNLOAD,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
827 log_message)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
828
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
829 except Exception:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
830 error_message = "from url " + \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
831 file_url[0][self._url_field]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
832
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
833 Logger.create_action_log(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
834 Logger.ACTION_ERROR,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
835 Logger.ACTION_TYPE_DOWNLOAD,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
836 error_message)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
837
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
838 for i, url in enumerate(file_url[1:], start=1):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
839 try:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
840 fits_file = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
841 FileHandler.download_file_from_url(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
842 url[self._url_field])
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
843
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
844 FileHandler.write_file_to_subdir(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
845 fits_file,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
846 FileHandler.get_file_name_from_url(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
847 url[self._url_field]))
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
848
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
849 log_message = "from url " + \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
850 url[self._url_field]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
851
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
852 Logger.create_action_log(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
853 Logger.ACTION_SUCCESS,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
854 Logger.ACTION_TYPE_DOWNLOAD,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
855 log_message)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
856
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
857 except Exception:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
858 error_message = "from url " + \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
859 url[self._url_field]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
860
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
861 Logger.create_action_log(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
862 Logger.ACTION_ERROR,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
863 Logger.ACTION_TYPE_DOWNLOAD,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
864 error_message)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
865
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
866 if self._html_file:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
867 html_file = OutputHandler.generate_html_output(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
868 file_url,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
869 archive_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
870 self._adql_query)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
871
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
872 FileHandler.write_file_to_output(html_file,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
873 self._output_html)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
874
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
875 if self._basic_html_file:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
876 html_file = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
877 OutputHandler.generate_basic_html_output(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
878 file_url,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
879 archive_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
880 self._adql_query)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
881
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
882 FileHandler.write_file_to_output(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
883 html_file,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
884 self._output_basic_html)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
885
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
886 summary_file = Logger.create_log_file(archive_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
887 self._adql_query)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
888 summary_file += "\n Tool run executed with success"
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
889
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
890 FileHandler.write_file_to_output(summary_file,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
891 self._output_error)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
892
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
893 else:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
894
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
895 summary_file = Logger.create_log_file(archive_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
896 self._adql_query)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
897
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
898 if error_message is None:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
899 summary_file += \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
900 "\n No resources matching parameters found"
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
901 else:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
902 summary_file += error_message
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
903
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
904 FileHandler.write_file_to_output(summary_file,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
905 self._output_error)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
906 else:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
907 summary_file = Logger.create_log_file("Archive",
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
908 self._adql_query)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
909
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
910 summary_file += "Unable to initialize archives"
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
911
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
912 FileHandler.write_file_to_output(summary_file,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
913 self._output_error)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
914
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
915
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
916 class ADQLObscoreQuery(BaseADQLQuery):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
917 order_by_field = {
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
918 'size': 'access_estsize',
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
919 'collection': 'obs_collection',
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
920 'object': 'target_name'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
921 }
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
922
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
923 base_query = 'SELECT TOP ' + \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
924 str(MAX_ALLOWED_ENTRIES) + \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
925 ' * FROM ivoa.obscore '
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
926
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
927 def __init__(self,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
928 dataproduct_type,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
929 obs_collection,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
930 obs_title,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
931 obs_id,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
932 facility_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
933 instrument_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
934 em_min,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
935 em_max,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
936 target_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
937 obs_publisher_id,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
938 s_fov,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
939 calibration_level,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
940 t_min,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
941 t_max,
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
942 cone_condition,
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
943 order_by):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
944
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
945 super().__init__()
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
946
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
947 if calibration_level == 'none':
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
948 calibration_level = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
949
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
950 if order_by == 'none':
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
951 order_by = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
952
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
953 if t_min == 'None' or t_min is None:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
954 t_min = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
955
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
956 if t_max == 'None' or t_max is None:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
957 t_max = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
958
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
959 if em_min == 'None' or em_min is None:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
960 em_min = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
961
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
962 if em_max == 'None' or em_max is None:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
963 em_max = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
964
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
965 if dataproduct_type == 'none' or dataproduct_type is None:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
966 dataproduct_type = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
967
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
968 if cone_condition is not None:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
969 self.cone_condition = cone_condition
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
970 else:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
971 self.cone_condition = None
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
972
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
973 self.parameters = {
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
974 'dataproduct_type': dataproduct_type,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
975 'obs_collection': obs_collection,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
976 'obs_title': obs_title,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
977 'obs_id': obs_id,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
978 'facility_name': facility_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
979 'instrument_name': instrument_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
980 'em_min': em_min,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
981 'em_max': em_max,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
982 'target_name': target_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
983 'obs_publisher_id': obs_publisher_id,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
984 's_fov': s_fov,
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
985 'calib_level': calibration_level,
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
986 't_min': t_min,
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
987 't_max': t_max,
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
988 }
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
989
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
990 self.order_by = order_by
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
991
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
992 def get_query(self):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
993 return ADQLObscoreQuery.base_query + \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
994 self.get_where_statement() + \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
995 self.get_order_by_statement()
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
996
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
997 def get_order_by_statement(self):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
998 if self.order_by != '':
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
999 return self._get_order_by_clause(self.order_by)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1000 else:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1001 return ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1002
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1003 def _get_order_by_clause(self, order_type):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1004
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1005 obscore_order_type = ADQLObscoreQuery.order_by_field[order_type]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1006
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1007 return super()._get_order_by_clause(obscore_order_type)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1008
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1009 def get_where_statement(self):
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1010 where_clause = self._get_where_clause(self.parameters)
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1011
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1012 if where_clause == '' and self.cone_condition is not None:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1013 where_clause = 'WHERE ' + self.get_cone_condition()
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1014 elif where_clause != '' and self.cone_condition is not None:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1015 where_clause += 'AND ' + self.get_cone_condition()
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1016
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1017 return where_clause
0
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astroteam
parents:
diff changeset
1018
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parents:
diff changeset
1019 def _get_where_clause(self, parameters):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1020 return super()._get_where_clause(parameters)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
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diff changeset
1021
1
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astroteam
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diff changeset
1022 def get_cone_condition(self):
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1023 return self.cone_condition
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1024
0
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astroteam
parents:
diff changeset
1025
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astroteam
parents:
diff changeset
1026 class ADQLTapQuery(BaseADQLQuery):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1027 base_query = 'SELECT TOP '+str(MAX_ALLOWED_ENTRIES)+' * FROM '
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
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parents:
diff changeset
1028
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diff changeset
1029 def __init__(self):
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parents:
diff changeset
1030 super().__init__()
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parents:
diff changeset
1031
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parents:
diff changeset
1032 def get_order_by_clause(self, order_type):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
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diff changeset
1033 return super()._get_order_by_clause(order_type)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
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parents:
diff changeset
1034
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parents:
diff changeset
1035 def get_query(self, table, where_field, where_condition):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
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diff changeset
1036 if where_field != '' and where_condition != '':
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
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parents:
diff changeset
1037 return ADQLTapQuery.base_query + \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1038 str(table) + \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1039 ' WHERE ' + \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1040 str(where_field) + ' = ' + '\'' + \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
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diff changeset
1041 str(where_condition) + '\''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
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parents:
diff changeset
1042 else:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
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diff changeset
1043 return ADQLTapQuery.base_query + str(table)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
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parents:
diff changeset
1044
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parents:
diff changeset
1045
1
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1046 class ADQLConeSearchQuery:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1047
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astroteam
parents: 0
diff changeset
1048 base_query = "SELECT TOP 100 * FROM ivoa.obscore"
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astroteam
parents: 0
diff changeset
1049
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astroteam
parents: 0
diff changeset
1050 def __init__(self, ra, dec, radius, time=None):
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1051
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astroteam
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diff changeset
1052 self.ra = ra
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1053 self.dec = dec
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1054 self.radius = radius
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1055 self.time = time
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1056
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diff changeset
1057 self._query = ADQLObscoreQuery.base_query
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astroteam
parents: 0
diff changeset
1058
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astroteam
parents: 0
diff changeset
1059 if self.ra and self.dec and self.radius:
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astroteam
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diff changeset
1060 self._query += " WHERE "
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1061 self._query += self._get_search_circle(ra, dec, radius)
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astroteam
parents: 0
diff changeset
1062
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astroteam
parents: 0
diff changeset
1063 if self.time:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1064 self._query += self._get_search_time()
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astroteam
parents: 0
diff changeset
1065
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astroteam
parents: 0
diff changeset
1066 def _get_search_circle(self, ra, dec, radius):
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1067 return "(CONTAINS" \
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astroteam
parents: 0
diff changeset
1068 "(POINT('ICRS', s_ra, s_dec), " \
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1069 "CIRCLE('ICRS', "+str(ra)+", "+str(dec)+", "+str(radius)+")" \
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1070 ") = 1)"
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1071
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1072 def _get_search_time(self):
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1073 return " AND t_min <= "+self.time+" AND t_max >= "+self.time
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1074
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1075 def get_query(self):
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1076 return self._query
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1077
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1078 @staticmethod
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1079 def get_search_circle_condition(ra, dec, radius):
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astroteam
parents: 0
diff changeset
1080 return "(CONTAINS" \
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astroteam
parents: 0
diff changeset
1081 "(POINT('ICRS', s_ra, s_dec)," \
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1082 "CIRCLE('ICRS', "+str(ra)+", "+str(dec)+", "+str(radius)+")" \
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1083 ") = 1) "
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1084
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astroteam
parents: 0
diff changeset
1085
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astroteam
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diff changeset
1086 class CelestialObject:
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1087
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astroteam
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diff changeset
1088 def __init__(self, name):
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1089 self.name = name
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1090 self.coordinates = None
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astroteam
parents: 0
diff changeset
1091
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astroteam
parents: 0
diff changeset
1092 self.coordinates = SkyCoord.from_name(self.name)
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1093
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astroteam
parents: 0
diff changeset
1094 def get_coordinates_in_degrees(self):
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astroteam
parents: 0
diff changeset
1095
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astroteam
parents: 0
diff changeset
1096 coordinates = {
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1097 'ra': '',
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1098 'dec': ''
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1099 }
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1100
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
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diff changeset
1101 ra_dec = self.coordinates.ravel()
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1102
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astroteam
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diff changeset
1103 coordinates['ra'] = ra_dec.ra.degree[0]
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1104 coordinates['dec'] = ra_dec.dec.degree[0]
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1105
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1106 return coordinates
667fc28d803c planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit f9ba105adfaad1b2a16dd570652aa27c508d3c4d
astroteam
parents: 0
diff changeset
1107
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astroteam
parents: 0
diff changeset
1108
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1109 class HTMLReport:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1110 _html_report_base_header = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1111 _html_report_base_body = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1112 _html_report_base_footer = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1113 _html_report_base_script = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1114
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1115 def __init__(self):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1116 pass
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1117
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1118
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1119 class OutputHandler:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1120
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1121 def __init__(self):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1122 pass
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1123
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1124 @staticmethod
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1125 def generate_html_output(urls_data, archive_name, adql_query):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1126 return OutputHandler.html_header + \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1127 OutputHandler.generate_html_content(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1128 urls_data,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1129 archive_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1130 adql_query,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1131 div_attr='class="title"',
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1132 table_attr='class="fl-table"')
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1133
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1134 @staticmethod
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1135 def generate_basic_html_output(urls_data,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1136 archive_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1137 adql_query, ):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1138 return OutputHandler.generate_html_content(urls_data,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1139 archive_name,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1140 adql_query)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1141
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1142 @staticmethod
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1143 def generate_html_content(urls_data, archive_name, adql_query,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1144 div_attr="", table_attr="border='1'"):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1145 html_file = \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1146 f"""
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1147 <div {div_attr}>
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1148 <h2>Resources Preview archive:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1149 <span>
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1150 {archive_name}
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1151 </span>
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1152 </h2>
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1153 <span>ADQL query : {adql_query}</span>
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1154 </div>"""
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1155
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1156 html_file += f'<table {table_attr}><thead><tr>'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1157
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1158 for key in Utils.collect_resource_keys(urls_data):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1159 html_file += '<th>' + str(key) + '</th>'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1160
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1161 html_file += '</thead></tr><tbody>'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1162
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1163 for resource in urls_data:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1164 html_file += '<tr>'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1165
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1166 for key, value in resource.items():
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1167 html_file += f'<td>{value}</td>'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1168
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1169 html_file += '<td>'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1170 for preview_key in \
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1171 ['preview', 'preview_url', 'postcard_url']:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1172 if preview_key in resource:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1173 html_file += (
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1174 '<details><summary>Preview</summary>'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1175 f'<img src="{resource[preview_key]}"/>'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1176 '</details>'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1177 )
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1178 html_file += '</td>'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1179 html_file += '</tr>'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1180
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1181 html_file += '</tbody></table>'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1182 return html_file
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1183
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1184 html_header = """ <head><style>
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1185
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1186 details {
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1187 padding: 10px;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1188 }
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1189
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1190 .table-wrapper {
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1191 margin: 10px 70px 70px;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1192 box-shadow: 0px 35px 50px rgba( 0, 0, 0, 0.2 );
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1193 }
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1194
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1195 .fl-table {
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1196 border-radius: 5px;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1197 font-size: 12px;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1198 font-weight: normal;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1199 border: none;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1200 border-collapse: collapse;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1201 width: 100%;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1202 max-width: 100%;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1203 white-space: nowrap;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1204 background-color: white;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1205 }
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1206
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1207 .fl-table td, .fl-table th {
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1208 text-align: center;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1209 padding: 8px;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1210 }
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1211
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1212 .fl-table td {
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1213 border: 1px solid #999999;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1214 font-size: 15px;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1215 }
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1216
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1217 .fl-table thead th {
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1218 color: #ffffff;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1219 background: #4FC3A1;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1220 border: 1px solid #999999;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1221 }
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1222
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1223
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1224 .fl-table thead th:nth-child(odd) {
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1225 color: #ffffff;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1226 background: #324960;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1227 }
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1228
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1229 .fl-table tr:nth-child(even) {
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1230 background: #F8F8F8;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1231 }
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1232
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1233 .title h2 {
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1234 text-align: center;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1235 font-size: 22px;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1236 font-weight: 700; color:#202020;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1237 text-transform: uppercase;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1238 word-spacing: 1px; letter-spacing:2px;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1239 margin-bottom: 50px;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1240 }
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1241
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1242 .title h2 span {
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1243 padding-top: 40px;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1244 text-transform: none;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1245 font-size:.80em;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1246 font-weight: bold;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1247 font-family: "Playfair Display","Bookman",serif;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1248 color:#999;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1249 letter-spacing:-0.005em;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1250 word-spacing:1px;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1251 letter-spacing:none;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1252 }
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1253
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1254 .title h1:before {
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1255 background-color: #dfdfdf;
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1256 }
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1257
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1258 </style></head>"""
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1259
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1260
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1261 class FileHandler:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1262
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1263 def __init__(self):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1264 pass
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1265
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1266 @staticmethod
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1267 def download_file_from_url(file_url):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1268 with request.urlopen(file_url) as response:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1269 fits_file = response.read()
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1270
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1271 return fits_file
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1272
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1273 @staticmethod
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1274 def write_file_to_output(file, output, write_type="w"):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1275 with open(output, write_type) as file_output:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1276 file_output.write(file)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1277
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1278 @staticmethod
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1279 def write_urls_to_output(urls: [], output, access_url="access_url"):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1280 with open(output, "w") as file_output:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1281 for url in urls:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1282 try:
2
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
1283 file_output.write(str(url[access_url]) + ',')
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1284 except Exception:
2
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
1285 error_message = f"url field {access_url} not found for url"
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1286 Logger.create_action_log(
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1287 Logger.ACTION_ERROR,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1288 Logger.ACTION_TYPE_WRITE_URL,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1289 error_message)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1290
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1291 @staticmethod
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1292 def write_file_to_subdir(file, index):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1293 dir = os.getcwd()
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1294
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1295 dir += '/fits'
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1296
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1297 upload_dir = os.path.join(dir, str(index) + '.fits')
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1298
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1299 with open(upload_dir, "wb") as file_output:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1300 file_output.write(file)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1301
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1302 @staticmethod
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1303 def get_file_name_from_url(url, index=None):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1304 url_parts = url.split('/')
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1305
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1306 file_name = ''
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1307
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1308 try:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1309 if (url_parts[-1]) != '':
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1310 file_name = url_parts[-1]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1311 elif len(url_parts) > 1:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1312 file_name = url_parts[-2]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1313 except Exception:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1314 file_name = 'archive file '
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1315
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1316 return file_name
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1317
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1318
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1319 class Utils:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1320
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1321 def __init__(self):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1322 pass
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1323
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1324 @staticmethod
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1325 def collect_resource_keys(urls_data: list) -> list:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1326 """
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1327 Collect all the keys from the resources,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1328 keeping the order in the order of key appearance in the resources
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1329 """
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1330
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1331 resource_keys = []
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1332 for resource in urls_data:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1333 for key in resource.keys():
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1334 if key not in resource_keys:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1335 resource_keys.append(key)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1336 return resource_keys
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1337
2
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
1338 @staticmethod
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
1339 def is_valid_url(url: str) -> bool:
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
1340 regex_url = re.compile(r'^https?://(?:[A-Za-z0-9-]+\.)+[A-Za-z]{2,6}(?::\d+)?(?:/[^\s]*)?$') # noqa: E501
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
1341 return re.match(regex_url, url) is not None
7398ea3d9ac4 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit b77ceb5085f378a8bef9b202b80e3ca7ef1e9a8e
astroteam
parents: 1
diff changeset
1342
0
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1343
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1344 class Logger:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1345 _logs = []
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1346
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1347 ACTION_SUCCESS = 1
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1348 ACTION_ERROR = 2
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1349
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1350 ACTION_TYPE = 1
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1351 INFO_TYPE = 2
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1352
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1353 ACTION_TYPE_DOWNLOAD = 1
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1354 ACTION_TYPE_ARCHIVE_CONNECTION = 2
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1355 ACTION_TYPE_WRITE_URL = 3
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1356 ACTION_TYPE_WRITE_FILE = 4
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1357
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1358 def __init__(self):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1359 pass
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1360
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1361 @staticmethod
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1362 def create_action_log(outcome, action, message) -> bool:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1363
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1364 is_log_created = False
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1365 log = ""
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1366
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1367 if action == Logger.ACTION_TYPE_DOWNLOAD:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1368 if outcome == Logger.ACTION_SUCCESS:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1369 log += "Success downloading file : " + message
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1370 else:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1371 log += "Error downloading file : " + message
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1372
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1373 is_log_created = True
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1374 elif action == Logger.ACTION_TYPE_ARCHIVE_CONNECTION:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1375 if outcome == Logger.ACTION_SUCCESS:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1376 log += "Success connecting to archive : " + message
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1377 else:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1378 log += "Error connecting to archive : " + message
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1379
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1380 is_log_created = True
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1381 elif action == Logger.ACTION_TYPE_WRITE_URL:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1382 if outcome == Logger.ACTION_SUCCESS:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1383 log += "Success writing url to file : " + message
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1384 else:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1385 log += "Error writing to file : " + message
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1386
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1387 is_log_created = True
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1388
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1389 if is_log_created:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1390 Logger._insert_log(Logger.ACTION_TYPE, log)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1391
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1392 return is_log_created
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1393
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1394 @staticmethod
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1395 def create_info_log(message):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1396 pass
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1397
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1398 @staticmethod
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1399 def _insert_log(type, log):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1400 Logger._logs.append(log)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1401
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1402 @staticmethod
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1403 def create_log_file(archive_name, query):
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1404 log_file = ""
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1405
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1406 log_file += "Run summary for archive : " + archive_name + "\n"
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1407 log_file += "With query : " + query + "\n"
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1408
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1409 for log in Logger._logs:
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1410 log_file += log + "\n"
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1411
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1412 return log_file
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1413
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1414
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1415 if __name__ == "__main__":
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1416 output = sys.argv[1]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1417 output_csv = sys.argv[2]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1418 output_html = sys.argv[3]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1419 output_basic_html = sys.argv[4]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1420 output_error = sys.argv[5]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1421
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1422 inputs = sys.argv[6]
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1423
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1424 tool_runner = ToolRunner(inputs,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1425 output,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1426 output_csv,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1427 output_html,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1428 output_basic_html,
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1429 output_error)
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1430
0ddfc343f9f9 planemo upload for repository https://github.com/esg-epfl-apc/tools-astro/tree/main/tools/ commit d68858614f92df46c58724928d918e989d916db0
astroteam
parents:
diff changeset
1431 tool_runner.run()