annotate export_iprscan_to_Excel/testfiles/Galaxy14-[Interproscan_calculation_on_data_3]_input.xml @ 0:a9762cd6e2e3 draft default tip

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author basfplant
date Tue, 05 Mar 2013 04:00:19 -0500
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1 <interpro_matches>
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2
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3 <protein id="MADS-box_protein__AGL45_" length="249" crc64="5518E4F05E8B7962" >
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4 <interpro id="IPR002100" name="Transcription factor, MADS-box" type="Domain">
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5 <classification id="GO:0003677" class_type="GO">
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6 <category>Molecular Function</category>
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7 <description>DNA binding</description>
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8 </classification>
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9 <classification id="GO:0046983" class_type="GO">
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10 <category>Molecular Function</category>
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11 <description>protein dimerization activity</description>
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12 </classification>
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13 <match id="PR00404" name="MADSDOMAIN" dbname="PRINTS">
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14 <location start="3" end="23" score="1.3e-10" status="T" evidence="FPrintScan" />
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15 <location start="23" end="38" score="1.3e-10" status="T" evidence="FPrintScan" />
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16 <location start="38" end="59" score="1.3e-10" status="T" evidence="FPrintScan" />
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17 </match>
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18 <match id="PF00319" name="SRF-TF" dbname="PFAM">
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19 <location start="11" end="50" score="5.2e-15" status="T" evidence="HMMPfam" />
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20 </match>
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21 <match id="SM00432" name="no description" dbname="SMART">
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22 <location start="1" end="60" score="3.4e-24" status="T" evidence="HMMSmart" />
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23 </match>
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24 <match id="SSF55455" name="SRF-like" dbname="SUPERFAMILY">
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25 <location start="2" end="96" score="4.3e-25" status="T" evidence="superfamily" />
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26 </match>
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27 </interpro>
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28 <interpro id="noIPR" name="unintegrated" type="unintegrated">
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29 <match id="PTHR11945" name="FAMILY NOT NAMED" dbname="PANTHER">
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30 <location start="2" end="234" score="8.7e-189" status="T" evidence="HMMPanther" />
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31 </match>
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32 <match id="PTHR11945:SF63" name=" MADS-BOX PROTEIN (AGL45)" dbname="PANTHER">
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33 <location start="2" end="234" score="8.7e-189" status="T" evidence="HMMPanther" />
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34 </match>
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35 </interpro>
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36 </protein>
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37
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38 </interpro_matches>