Mercurial > repos > bebatut > format_cd_hit_output

diff format_cd_hit_output.xml @ 1:64da677bcee2 draft default tip

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/format_cd_hit_output/ commit eea46077010e699403ce6995d7d4aac77b2e0b43"
author bgruening
date Wed, 19 Oct 2022 14:42:33 +0000
parents 4015e9d6d277
children
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--- a/format_cd_hit_output.xml	Tue Apr 26 08:55:33 2016 -0400
+++ b/format_cd_hit_output.xml	Wed Oct 19 14:42:33 2022 +0000
@@ -1,4 +1,4 @@
-<tool id="format_cd_hit_output" name="Format cd-hit outputs" version="1.0.0">
+<tool id="format_cd_hit_output" name="Format cd-hit outputs" version="1.0.0+galaxy1">
     <description>to rename representative sequences with cluster name and/or extract distribution inside clusters given a mapping file</description>
 
     <requirements>
@@ -76,7 +76,13 @@
             <param name="input_mapping" value="input_mapping.txt"/>
             <param name="number_sum" value="true"/>
             <output name="output_representative_sequences" file="rename_representative_sequences_output.fasta"/>
-            <output name="output_category_distribution" file="extract_category_distribution_output.tabular"/>
+            <output name="output_category_distribution">
+                <assert_contents>
+                    <has_size value="139937" delta="100" />
+                    <has_n_lines n="2990"/>
+                    <has_text text="amoA_arc_19F-TV1-T0-b"/>
+                </assert_contents>
+            </output>
         </test>
     </tests>
 
@@ -101,4 +107,4 @@
     </help>
 
     <citations></citations>
-</tool>
\ No newline at end of file
+</tool>