Mercurial > repos > bgruening > bionano_scaffold

annotate macros.xml @ 10:22286dab5aa1 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/bionano commit bf9f16e7144d2a619863c84a4aede8c9ef520d0e
author bgruening
date Wed, 18 Jan 2023 15:22:13 +0000
parents faee8629b460
children 3371c5bdc17a
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fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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1 <macros>
8
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2 <token name="@TOOL_VERSION@">3.7.0</token>
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22286dab5aa1 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/bionano commit bf9f16e7144d2a619863c84a4aede8c9ef520d0e
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3 <token name="@VERSION_SUFFIX@">2</token>
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9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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4 <token name="@BIONANO_SUPPORT_TEXT@">
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5 Bionano Genomics has agreed to provide the licensed Bionano Solve
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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6 software to enable the VGP to package the software in a container.
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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7 Bionanno Solve as shipped in this container may not be the latest and
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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8 may not run efficiently on non-validated hardware. Hence, it is not
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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9 supported by Bionano Genomics. Any questions concerning this version
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10 should be passed to the VGP (https://github.com/VGP/vgp-assembly/issues)
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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11 or Galaxy community (https://help.galaxyproject.org).
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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12 For the latest supported Bionano software, visit Bionano Support
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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13 https://bionanogenomics.com/support/
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14 </token>
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15 <xml name="edam_ontology">
1
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16 <edam_topics>
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17 <edam_topic>topic_0196</edam_topic>
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18 </edam_topics>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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19 <edam_operations>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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20 <edam_operation>operation_0525</edam_operation>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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21 </edam_operations>
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22 </xml>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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23 <xml name="requirements">
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24 <requirements>
8
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25 <container type="docker">quay.io/galaxy/bionano-docker-scaffold:1.7.0-bio</container>
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26 </requirements>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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27 </xml>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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28 <macro name="sanitize_string" >
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29 <sanitizer invalid_char="">
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30 <valid initial="string.letters,string.digits">
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31 </valid>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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32 </sanitizer>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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33 </macro>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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34 <xml name="citations">
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35 <citations>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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36 <citation type="doi">10.1186/s12864-015-1911-8</citation>
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37 </citations>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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38 </xml>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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39 </macros>