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diff get_pubchem/get_pubchem_as_smiles.py @ 4:7c1f9962ac07 draft

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Add temporary hack until my galaxy stdout/stderr UTF-8 bug is fixed.
author bgruening
date Fri, 27 Sep 2013 15:51:46 -0400
parents 021f0ef9474f
children
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line diff
--- a/get_pubchem/get_pubchem_as_smiles.py	Wed Sep 18 09:44:36 2013 -0400
+++ b/get_pubchem/get_pubchem_as_smiles.py	Fri Sep 27 15:51:46 2013 -0400
@@ -29,7 +29,7 @@
     result.get()
 
     for filename in os.listdir(td):
-        path = os.path.join(td, filename)  + '.smi'
+        path = os.path.join(td, filename)
         shutil.copyfileobj(open(path, 'rb'), output_handle)
 
     output_handle.close()